{"id":"W2188684461","doi":"10.3389/fmicb.2015.01356","title":"Prevalence and Characterization of Shiga Toxin-Producing and Enteropathogenic Escherichia coli in Shellfish-Harvesting Areas and Their Watersheds","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"European Regional Development Fund; Agence de l'eau Loire-Bretagne; Interreg; Xunta de Galicia; University of Brighton","keywords":"Intimin; Microbiology; Shellfish; Biology; STX2; Virulence; Shiga toxin; Serotype; Escherichia coli; Bacterial adhesin; Enteropathogenic Escherichia coli; Shiga-like toxin; Gene; Enterobacteriaceae; Aquatic animal; Genetics; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004405618,0.0002764782,0.0003755694,0.001168627,0.0004033766,0.0006542662,0.0002277613,0.0003078473,0.0004706554],"category_scores_gemma":[0.0008082549,0.0002384883,0.0002167843,0.0009934087,0.0005044381,0.000396483,0.0004317249,0.0001983438,0.0001322317],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005287596,"about_ca_system_score_gemma":0.0004763894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02216832,"about_ca_topic_score_gemma":0.02688398,"domain_scores_codex":[0.9996118,0.00004213041,0.00004624862,0.0001109564,0.00009917162,0.00008977995],"domain_scores_gemma":[0.9992751,0.00007096348,0.0002401745,0.00004034407,0.0001865839,0.0001868494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004312615,0.00002097002,0.9938889,0.000007266242,0.00001203929,0.0001545808,0.0003644617,0.00002050184,0.004490132,0.000004338532,0.00001038473,0.0009833368],"study_design_scores_gemma":[9.905729e-7,0.00003797876,0.9992539,0.000001214541,0.00000357262,0.00009002349,0.0003413511,0.00002500768,0.000188748,0.000001852152,0.00005371531,0.000001501678],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998695,0.00002271358,0.00001998074,0.000002255076,2.849858e-7,0.000001962773,0.00004220824,6.799995e-7,0.00004045184],"genre_scores_gemma":[0.9994773,0.00005015263,0.00008519648,0.000006773525,0.000001449347,0.000004504367,0.0002217754,9.270586e-7,0.0001519774],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02216832,"threshold_uncertainty_score":0.04407853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01118275740793557,"score_gpt":0.2241765500710758,"score_spread":0.2129937926631402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}