{"id":"W2190527879","doi":"10.1016/j.oraloncology.2015.06.013","title":"Integrative genomic analysis of ghost cell odontogenic carcinoma","year":2015,"lang":"en","type":"letter","venue":"Oral Oncology","topic":"Oral and Maxillofacial Pathology","field":"Dentistry","cited_by":32,"is_retracted":false,"has_abstract":false,"ca_institutions":"Simon Fraser University; BC Cancer Agency; University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Transcriptome; Biology; Gene expression profiling; Computational biology; Genome; Gene; Odontogenic; Genetics; Cancer research; Medicine; Gene expression; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003512023,0.0005096237,0.002336292,0.0008137505,0.00005120322,0.00001789285,0.0007101354,0.002327489,0.001997052],"category_scores_gemma":[0.00007726046,0.0004243148,0.0008577665,0.0007583735,0.000399203,0.00006761411,0.0003340786,0.001731496,0.001241101],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006794998,"about_ca_system_score_gemma":0.000629592,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002665587,"about_ca_topic_score_gemma":0.003885808,"domain_scores_codex":[0.9968794,0.0006195235,0.0008251657,0.0007466987,0.0003118996,0.0006173262],"domain_scores_gemma":[0.9978126,0.0001403488,0.0008387803,0.0006919684,0.0003962922,0.0001200431],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001331661,0.0001244481,0.01135254,0.00005854262,0.00119584,0.004995728,0.0004149948,0.00000876934,0.003240743,0.00004597746,0.9757958,0.002633478],"study_design_scores_gemma":[0.0007276036,0.0008604439,0.0126019,0.000004687552,0.004485811,0.00008838175,0.0001407797,0.0000281929,0.0003487157,0.0002357287,0.9800465,0.000431298],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8242357,0.002015458,0.0001413416,0.07183733,0.007042051,0.0009221099,0.003314472,0.0001532516,0.09033826],"genre_scores_gemma":[0.4989872,0.00009097056,0.001400947,0.3526464,0.00366533,0.0001284923,0.007086265,0.0002231494,0.1357712],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3252486,"threshold_uncertainty_score":0.9998209,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04314460443060312,"score_gpt":0.3160625734984462,"score_spread":0.272917969067843,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}