{"id":"W2191549327","doi":"10.1128/aac.02661-15","title":"Molecular Characterization by Using Next-Generation Sequencing of Plasmids Containing <i>bla</i> <sub>NDM-7</sub> in Enterobacteriaceae from Calgary, Canada","year":2015,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; Calgary Laboratory Services","keywords":"Enterobacteriaceae; Klebsiella pneumoniae; Plasmid; Serratia marcescens; Microbiology; Biology; Escherichia coli; Bacteria; Molecular epidemiology; Enterobacteriaceae Infections; Transmission (telecommunications); Colonization; Gene; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001354772,0.0002710965,0.0002766454,0.001032619,0.0006517317,0.0007225365,0.0002715442,0.0002702093,0.0004763406],"category_scores_gemma":[0.0006780599,0.0001392545,0.000350964,0.001560576,0.0003409294,0.0001262709,0.0002597051,0.0003884986,0.000304787],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002671663,"about_ca_system_score_gemma":0.004230733,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5759821,"about_ca_topic_score_gemma":0.6153736,"domain_scores_codex":[0.9997309,0.00001005661,0.00001614861,0.00005023684,0.0001204489,0.00007206464],"domain_scores_gemma":[0.9995079,0.00005384694,0.00009949437,0.00002984182,0.0002391184,0.00006977329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002319101,0.0001096482,0.1278333,0.0001744204,0.00006416011,0.0009588723,0.001271127,0.0007979454,0.838469,0.0003010233,0.0007841897,0.0290044],"study_design_scores_gemma":[0.00001447012,0.0001857035,0.8671671,0.00004264152,0.00009813795,0.001298431,0.001614839,0.002253116,0.1117881,0.00009287616,0.01540746,0.00003730236],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881175,0.0008010154,0.003165599,0.0001715227,0.00001958758,0.0001098714,0.005349637,0.00007018598,0.002195109],"genre_scores_gemma":[0.9632494,0.001474629,0.01437336,0.000221294,0.00001324528,0.00006608601,0.01570965,0.00005863434,0.004833746],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4240179,"threshold_uncertainty_score":0.8530301,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02367979340906033,"score_gpt":0.2246658885811551,"score_spread":0.2009860951720948,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}