{"id":"W2191752016","doi":"10.1093/gbe/evv245","title":"Population Variation Reveals Independent Selection toward Small Body Size in Chinese Debao Pony","year":2015,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Pony; Biology; Breed; Single-nucleotide polymorphism; Genetics; Population; Evolutionary biology; Candidate gene; Genetic variation; Trait; Gene; Genotype; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003583057,0.0001338921,0.0001376306,0.00004946889,0.00005915584,0.0000090087,0.00007234108,0.0003188089,0.000008002677],"category_scores_gemma":[0.0001670845,0.000125093,0.00002731244,0.0001113616,0.00003535053,0.000006257117,0.00005246247,0.00009510497,0.000006763196],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006523931,"about_ca_system_score_gemma":0.0000540689,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003463553,"about_ca_topic_score_gemma":0.0002407664,"domain_scores_codex":[0.9990432,0.000152902,0.0002198392,0.0003272141,0.00005112446,0.0002057705],"domain_scores_gemma":[0.9996443,0.00001358377,0.00008516885,0.0001151853,0.00006450179,0.00007729534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002389631,0.00006037007,0.82638,0.00001218751,0.00002366896,1.66398e-7,0.0002330952,0.0009056795,0.1682155,0.003439017,0.00003121616,0.000460161],"study_design_scores_gemma":[0.0006374038,0.0003631344,0.9716923,0.000003287218,0.00001083662,0.00001772876,0.00003384873,0.00008403647,0.00009111306,0.02672461,0.0001984095,0.0001433008],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9764081,0.0009583624,0.0217787,0.00008830352,0.0002710012,0.0002093106,0.000009870326,0.00001468957,0.0002616255],"genre_scores_gemma":[0.9946967,0.00003177707,0.004428615,0.00006983683,0.00032656,0.00002306299,0.000228966,0.000009260327,0.0001851823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1681244,"threshold_uncertainty_score":0.5101144,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01198952307163388,"score_gpt":0.2459274907769746,"score_spread":0.2339379677053407,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}