{"id":"W2191792183","doi":"10.1128/genomea.01266-15","title":"Draft Genome Sequences of Facultative Methylotrophs, <i>Gemmobacter</i> sp. Strain LW1 and <i>Mesorhizobium</i> sp. Strain 1M-11, Isolated from Movile Cave, Romania","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Environment Research Council; Queen's University; Earth and Life Systems Alliance; University of Warwick; University of East Anglia; Queen's University Belfast; Sight Research UK","keywords":"Strain (injury); Mesorhizobium; Biology; Facultative; Genome; Microbiology; Symbiosis; Genetics; Gene; Botany; Bacteria; Rhizobia; Anatomy","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003482468,0.0003938216,0.0004441417,0.00008222987,0.0001165968,0.00005607199,0.0003166351,0.0002426198,0.0001192529],"category_scores_gemma":[0.0000445892,0.0003778966,0.0000992406,0.0001970031,0.0001938307,0.00003751527,0.0002045521,0.0001301675,0.00003918543],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004671195,"about_ca_system_score_gemma":0.0001567317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000702361,"about_ca_topic_score_gemma":0.0001500963,"domain_scores_codex":[0.9977947,0.0001665991,0.0005326147,0.0007148705,0.0003075443,0.0004836011],"domain_scores_gemma":[0.9987543,0.00001202685,0.0003024021,0.0003964601,0.000285752,0.0002490574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002187878,0.0001019986,0.0005668437,0.00002635254,0.0001915369,0.000008453374,0.0010435,0.00008076048,0.996334,0.0000184231,0.00104984,0.0003594944],"study_design_scores_gemma":[0.008334749,0.00310457,0.02557816,0.00009102952,0.0005133408,0.00004541929,0.005113137,0.00008045395,0.2877256,0.000862418,0.6663904,0.002160781],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9795108,0.004013787,0.001602699,0.00007201239,0.000340382,0.0004325385,0.01353147,0.000025469,0.0004708379],"genre_scores_gemma":[0.9855887,0.0007530283,0.002441253,0.0005579141,0.0004649204,0.00003574572,0.009103479,0.00005696424,0.0009979379],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7086084,"threshold_uncertainty_score":0.9998673,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01829549925975318,"score_gpt":0.2385597727090394,"score_spread":0.2202642734492862,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}