{"id":"W2192362811","doi":"10.1139/bcb-2015-0097","title":"The quinone-binding site of <i>Acidithiobacillus ferrooxidans</i> sulfide: quinone oxidoreductase controls both sulfide oxidation and quinone reduction","year":2015,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Sulfur Compounds in Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Quinone; Chemistry; Flavin adenine dinucleotide; Flavin group; Cofactor; Oxidoreductase; Sulfide; Binding site; Benzoquinone; Stereochemistry; Enzyme; Biochemistry; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008861917,0.0003579944,0.0002130941,0.00007548451,0.0001359969,0.0002122346,0.0002544721,0.0002485524,0.0006986447],"category_scores_gemma":[0.0001618752,0.0001310322,0.0001345716,0.00007822322,0.0002130917,0.0001628803,0.0001576341,0.0001944624,0.0005594488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004710183,"about_ca_system_score_gemma":0.0002046372,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002555606,"about_ca_topic_score_gemma":0.001872186,"domain_scores_codex":[0.9998797,0.00001626162,0.000007841033,0.00003680337,0.00003501001,0.00002427227],"domain_scores_gemma":[0.9998983,0.00001496376,0.0000353326,0.00001049856,0.00002136884,0.00001955021],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003234025,0.000006500279,0.000269837,0.000009864525,0.000001350326,0.00001563195,0.000006880791,0.00005405976,0.9989468,0.00005021482,0.00001759625,0.0005889495],"study_design_scores_gemma":[0.000004578245,0.00004824878,0.00441872,0.000002308204,0.000003235952,0.000115375,0.00001896985,0.001514708,0.9927493,0.00005034482,0.001070064,0.000004031657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934097,0.0005177276,0.00480733,0.00006438681,0.0000132295,0.00001277922,0.0001948425,0.0001650992,0.0008147915],"genre_scores_gemma":[0.99691,0.0001303466,0.001827024,0.00001647038,0.0000022762,0.000004968455,0.0002885678,0.00002476715,0.0007955399],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002555606,"threshold_uncertainty_score":0.005081475,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01375339094425044,"score_gpt":0.2425666860658784,"score_spread":0.228813295121628,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}