{"id":"W2196154540","doi":"10.1016/j.tplants.2015.11.014","title":"Why Benthamiana Went Viral","year":2015,"lang":"en","type":"article","venue":"Trends in Plant Science","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Nicotiana benthamiana; Biology; Virology; Viral infection; Plant virus; Computational biology; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001911929,0.0000621504,0.00005217936,0.00008649992,0.00004599025,0.00001926805,0.000287873,0.00003124982,0.00001109165],"category_scores_gemma":[0.00001039839,0.00005304789,0.00001732862,0.0002463795,0.0001460895,0.000005269044,0.00004625777,0.00004257904,0.000009579288],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001403439,"about_ca_system_score_gemma":0.00006439316,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006113554,"about_ca_topic_score_gemma":0.0003171596,"domain_scores_codex":[0.9992987,0.000007675321,0.00009058649,0.000246922,0.0001558445,0.000200303],"domain_scores_gemma":[0.9996665,0.000002364876,0.00002048783,0.0001920383,0.00001487823,0.0001037674],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008643739,0.0002541556,0.01424551,0.000003899847,0.0000100153,0.00001959185,0.0003126877,0.0005418344,0.8571068,0.004272209,0.09880162,0.02434524],"study_design_scores_gemma":[0.0013821,0.0002919523,0.06743097,0.00001844279,0.00001052326,0.0001103935,0.0001660021,0.001330461,0.2037574,0.0004072915,0.724587,0.0005075409],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984801,0.000127516,0.000462098,0.0005841035,0.0001563788,0.00004402978,0.0001611605,0.00001222094,0.0136515],"genre_scores_gemma":[0.9987033,0.00001866186,0.0003899299,0.0003350772,0.00004195092,0.000007944526,0.00009954133,0.000002893127,0.0004007027],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6533494,"threshold_uncertainty_score":0.216323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02973482893688798,"score_gpt":0.2905706046067246,"score_spread":0.2608357756698366,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}