{"id":"W2197005117","doi":"10.1128/jb.00922-15","title":"Iron Acquisition in Mycobacterium avium subsp. paratuberculosis","year":2015,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Paratuberculosis; Biology; Transposon mutagenesis; Microbiology; Siderophore; Mutant; Mycobacterium; Transposable element; Pathogen; Gene; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009000103,0.0001686422,0.0006401088,0.000447753,0.00002031734,0.0000293976,0.0001475302,0.0002182346,0.0004153109],"category_scores_gemma":[0.0004534905,0.0001320479,0.0001657471,0.0002505542,0.00008908319,0.0002931951,0.00005858301,0.0004682075,0.0001133003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002761027,"about_ca_system_score_gemma":0.0003840415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006212047,"about_ca_topic_score_gemma":0.00001817694,"domain_scores_codex":[0.9981311,0.0002606944,0.0007035852,0.0001780592,0.0003073179,0.0004192461],"domain_scores_gemma":[0.9983622,0.0001326218,0.0002919275,0.0002268648,0.0004308057,0.0005555695],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003567677,0.0005560949,0.7928768,0.0001070054,0.00008528983,0.001305559,0.0004009264,0.000009237661,0.1872729,0.00005749473,0.01182148,0.001939528],"study_design_scores_gemma":[0.003800148,0.00314819,0.9744131,0.0001621075,0.00007770085,0.002268886,0.0001722653,0.00002237567,0.004328855,0.0001944973,0.01126147,0.0001503813],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937831,0.0005234401,0.00002292199,0.003611807,0.0007180682,0.0001570351,0.000008491702,0.00001166532,0.001163463],"genre_scores_gemma":[0.9972978,0.0004694474,0.0005564408,0.0007520497,0.0007674595,0.00000914976,0.00002920688,0.00001926342,0.00009923719],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1829441,"threshold_uncertainty_score":0.5384757,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03093540516465586,"score_gpt":0.3112762753583048,"score_spread":0.2803408701936489,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}