{"id":"W2197468298","doi":"10.1038/gene.2015.41","title":"Survival analysis and microarray profiling identify Cd40 as a candidate for the Salmonella susceptibility locus, Ity5","year":2015,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University; McGill Genome Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Congenic; Salmonella; Immunology; Microarray analysis techniques; Genetics; Gene; Gene expression profiling; Salmonella infection; CD40; Immune system; Gene expression; Cytotoxic T cell","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001083414,0.0002547802,0.0002054364,0.0005458986,0.0002629677,0.0004196369,0.000135174,0.0003141749,0.002366358],"category_scores_gemma":[0.0001856202,0.0001234996,0.0003559827,0.0002822579,0.0001437526,0.0001066737,0.0002287386,0.0004228213,0.0006660542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003933326,"about_ca_system_score_gemma":0.000172204,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001340813,"about_ca_topic_score_gemma":0.001972975,"domain_scores_codex":[0.9998584,0.00001120543,0.000008231494,0.00003720737,0.00004044105,0.00004451788],"domain_scores_gemma":[0.9998459,0.00003120974,0.00003872021,0.00001282506,0.00002437218,0.00004699214],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001234244,0.00001139799,0.001794707,0.000007975583,0.000003038875,0.00004305671,0.00001267588,0.00003047101,0.996919,0.00006514353,0.0000458704,0.0009431571],"study_design_scores_gemma":[0.00001343886,0.0003100587,0.2147703,0.00000721073,0.00003208291,0.00050577,0.0001978718,0.003505335,0.7756372,0.000264948,0.004741053,0.00001468472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930003,0.0003086696,0.003701108,0.00009240168,0.00002154812,0.00001332567,0.00167989,0.00009363855,0.001089195],"genre_scores_gemma":[0.9875958,0.0001546247,0.003479987,0.00007665867,0.0000111833,0.00002229889,0.002963217,0.00003406165,0.005662194],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002366358,"threshold_uncertainty_score":0.007916272,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02634068967920332,"score_gpt":0.2890922177241335,"score_spread":0.2627515280449301,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}