{"id":"W2204178770","doi":"10.1104/pp.15.00853","title":"A Systems Genetics Approach Identifies Gene Regulatory Networks Associated with Fatty Acid Composition in <i>Brassica rapa</i> Seed","year":2015,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Research Council (Canada)","funders":"","keywords":"Biology; Quantitative trait locus; Fatty acid; Expression quantitative trait loci; Polyunsaturated fatty acid; Linoleic acid; Fatty acid desaturase; Gene; Brassica rapa; Genetics; Erucic acid; Doubled haploidy; Linolenic acid; Oleic acid; Locus (genetics); Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002476539,0.0002308275,0.0003736945,0.0000576998,0.00006105663,0.00002810611,0.000214032,0.0003045095,6.598635e-7],"category_scores_gemma":[0.00002182954,0.0001790126,0.00005193139,0.0001139292,0.0001278587,0.000007258657,0.00009290734,0.0001242125,0.000003005752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002326675,"about_ca_system_score_gemma":0.00006004521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001325602,"about_ca_topic_score_gemma":0.00002453793,"domain_scores_codex":[0.9985107,0.0002874892,0.0002718692,0.0004423402,0.0001290459,0.0003585599],"domain_scores_gemma":[0.9992718,0.00002274751,0.0001670015,0.0003412015,0.00008794077,0.0001093456],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003363706,0.000192937,0.002598401,0.00001777457,0.0001094095,0.000003855044,0.00005233055,0.003712137,0.9922127,0.00002447679,0.0006952331,0.00004433782],"study_design_scores_gemma":[0.001533865,0.0002145771,0.07193968,0.00004514253,0.00006998106,0.00004247012,0.0001170927,0.00617063,0.9185693,0.00001906654,0.0008396264,0.0004385275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959821,0.002018984,0.001122038,0.00001372025,0.0002707695,0.0002458428,0.00005291158,0.00002771599,0.0002658903],"genre_scores_gemma":[0.9966479,0.00008707574,0.0002061244,0.0001313184,0.0004617796,0.00005028519,0.002339514,0.0000247753,0.00005121074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0736434,"threshold_uncertainty_score":0.7299923,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01291401232801144,"score_gpt":0.1961363897612044,"score_spread":0.1832223774331929,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}