{"id":"W2204245756","doi":"10.1038/ncomms9821","title":"A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development","year":2015,"lang":"en","type":"article","venue":"Nature Communications","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; Fonds Wetenschappelijk Onderzoek; Belgian Federal Science Policy Office; Division of Molecular and Cellular Biosciences; Natural Sciences and Engineering Research Council of Canada; Vlaamse regering; Universiteit Gent; Ministry of Education, Culture, Sports, Science and Technology; Bijzonder Onderzoeksfonds UGent; National Science Foundation","keywords":"Auxin; Cell biology; Transcription factor; Lateral root; Transcription (linguistics); Biology; Directionality; Arabidopsis; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002945701,0.0005733944,0.0004455438,0.0003022786,0.0003204626,0.0006228036,0.001068707,0.0007251926,0.005570316],"category_scores_gemma":[0.0004220287,0.0003361187,0.000638129,0.0001996393,0.0004950187,0.001217995,0.0005316931,0.0005913887,0.001161779],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004255463,"about_ca_system_score_gemma":0.0004708585,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003706067,"about_ca_topic_score_gemma":0.0006138193,"domain_scores_codex":[0.9998022,0.00002782717,0.00001108272,0.00007355722,0.00004644233,0.00003888259],"domain_scores_gemma":[0.9998701,0.00003022908,0.00002163529,0.00002188143,0.00003001069,0.00002602579],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003060091,0.00009285901,0.0007257012,0.0002629898,0.00004987203,0.000494475,0.00008457909,0.01880288,0.9122691,0.05576473,0.0004907784,0.01065599],"study_design_scores_gemma":[0.0002402341,0.001208722,0.002851071,0.00004719968,0.0001707739,0.0006067224,0.0001638745,0.5228841,0.3970604,0.06887259,0.005785685,0.0001087353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.410641,0.0009188105,0.5723161,0.001018062,0.0003166994,0.0001685822,0.0004306224,0.001472246,0.01271798],"genre_scores_gemma":[0.9583048,0.0003968882,0.03503885,0.0001718674,0.00004070911,0.0001870545,0.0002278483,0.00004354316,0.005588592],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.005570316,"threshold_uncertainty_score":0.01863456,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06569680200220891,"score_gpt":0.3021094449807127,"score_spread":0.2364126429785038,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}