{"id":"W2204910515","doi":"10.1128/aem.01699-15","title":"Development and Evaluation of Three Real-Time PCR Assays for Genotyping and Source Tracking Cryptosporidium spp. in Water","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Genotyping; Cryptosporidium; Biology; Cryptosporidium parvum; 18S ribosomal RNA; Genotype; Microbiology; Ribosomal RNA; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005467055,0.0001221723,0.000207743,0.00005794159,0.00008818517,0.000004718782,0.00003018743,0.0001782105,0.00005402916],"category_scores_gemma":[0.00001068097,0.0001020693,0.00001195392,0.00001459544,0.0002250489,0.00002586246,0.00007134378,0.00007012277,0.00002423448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005238202,"about_ca_system_score_gemma":0.00001846068,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003079891,"about_ca_topic_score_gemma":0.00002096987,"domain_scores_codex":[0.9992803,0.00003883099,0.0002193567,0.0002301049,0.00001381623,0.0002175797],"domain_scores_gemma":[0.9997648,0.00008494853,0.00005260896,0.00006804448,0.000008305655,0.00002128887],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006073128,0.00005852801,0.008353828,0.00001064883,0.00003904455,2.565883e-7,0.0009458782,0.00003216944,0.97734,0.0001631813,0.0000332415,0.01296246],"study_design_scores_gemma":[0.008496695,0.0002805944,0.09030628,0.00003576943,0.0002090586,0.0002410066,0.001883035,0.0001603072,0.8764709,0.001615091,0.01976064,0.0005406362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981316,0.0006820962,0.0003789272,0.00001944813,0.00006729033,0.0003528387,0.00001779468,0.000008090009,0.0003419035],"genre_scores_gemma":[0.9985864,0.00006882592,0.0008922896,0.00003054608,0.00001140464,0.0000453578,0.000321536,0.000009386847,0.00003432606],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1008691,"threshold_uncertainty_score":0.4162267,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02445220320030352,"score_gpt":0.2287111118136858,"score_spread":0.2042589086133823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}