{"id":"W2207408507","doi":"10.1111/mpp.12356","title":"Genome‐wide transcriptomic analyses provide insights into the lifestyle transition and effector repertoire of <i>Leptosphaeria maculans</i> during the colonization of <i>Brassica napus</i> seedlings","year":2015,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Saskatchewan Canola Development Commission","keywords":"Biology; Leptosphaeria maculans; WRKY protein domain; Transcriptome; Genetics; Elicitor; Effector; Gene; Jasmonic acid; Plant defense against herbivory; Arabidopsis; Gene expression; Cell biology; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009186906,0.0002711166,0.0002622833,0.000339868,0.0001674813,0.0003389631,0.0001165562,0.0002296157,0.0005722939],"category_scores_gemma":[0.00008450863,0.0001723634,0.0002603857,0.0002927389,0.0001485566,0.0001935596,0.0001802217,0.0003184054,0.000266231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002023298,"about_ca_system_score_gemma":0.0001106419,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001178001,"about_ca_topic_score_gemma":0.002372572,"domain_scores_codex":[0.9999107,0.00000482207,0.000003456058,0.0000461312,0.00001486064,0.00002002477],"domain_scores_gemma":[0.9999104,0.00001477351,0.0000338209,0.000006767831,0.00001422483,0.00002010897],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005112684,0.000004409568,0.002476662,0.00003417798,0.000008054109,0.00002653422,0.00003277671,0.00003096106,0.9963256,0.00001748554,0.00003424483,0.0009579808],"study_design_scores_gemma":[0.00001367317,0.0002243731,0.8840456,0.00002054878,0.00008294216,0.0004122317,0.0003060234,0.001612246,0.1092116,0.0001579921,0.003890577,0.00002219324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917728,0.001124688,0.00157877,0.00006376983,0.000007649429,0.0000152699,0.004705276,0.00007401629,0.0006576699],"genre_scores_gemma":[0.985973,0.0009434153,0.002274852,0.0001333258,0.00001546325,0.000054943,0.00873364,0.00004118904,0.001830029],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001178001,"threshold_uncertainty_score":0.002342343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01140886066420563,"score_gpt":0.2140100522501955,"score_spread":0.2026011915859899,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}