{"id":"W2213029072","doi":"10.1146/annurev-micro-102215-095301","title":"Xenogeneic Silencing and Its Impact on Bacterial Genomes","year":2016,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Gene silencing; Biology; Horizontal gene transfer; Nucleoid; Gene; Genome; Nucleoprotein; Adaptation (eye); Argonaute; Genetics; Computational biology; Cell biology; RNA interference; RNA; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003322446,0.0005534421,0.0007419469,0.0009400683,0.0002186109,0.0009460764,0.0004181377,0.0008597611,0.001714026],"category_scores_gemma":[0.0003383569,0.000177293,0.0002949549,0.0008381539,0.0005204225,0.0008273748,0.0007142043,0.000791389,0.0009470459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005518532,"about_ca_system_score_gemma":0.0005847901,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006184151,"about_ca_topic_score_gemma":0.0007299675,"domain_scores_codex":[0.9998517,0.00002631565,0.00001453197,0.00003195114,0.0000569551,0.00001849164],"domain_scores_gemma":[0.9998636,0.00006643271,0.00002502974,0.000005769559,0.00002496383,0.00001425574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009496859,0.00003583785,0.0004578215,0.01132413,0.0000705616,0.0005211132,0.0001763979,0.0007064813,0.03829937,0.01339833,0.0103251,0.92459],"study_design_scores_gemma":[0.000007186665,0.0001314299,0.001469478,0.001528342,0.000081033,0.00238058,0.00008670488,0.0001472522,0.01457127,0.003563652,0.976002,0.00003123728],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008552124,0.9968277,0.0002775469,0.0002406877,0.0001260487,0.000002729975,0.00002113167,0.00001157165,0.001637334],"genre_scores_gemma":[0.004612641,0.9938846,0.0002612246,0.0001630867,0.0001252107,0.000006370686,0.00003667192,0.000004001044,0.0009061757],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.001714026,"threshold_uncertainty_score":0.005733967,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01131162818513535,"score_gpt":0.3056559258870769,"score_spread":0.2943442977019415,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}