{"id":"W2215386903","doi":"10.1139/gen-2015-0054","title":"CACTA-superfamily transposable element is inserted in MYB transcription factor gene of soybean line producing variegated seeds","year":2015,"lang":"en","type":"article","venue":"Genome","topic":"Plant Genetic and Mutation Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Illinois at Urbana-Champaign; China Scholarship Council","keywords":"Biology; Genetics; Gene; Inverted repeat; Transposable element; Intron; Gene duplication; Nucleic acid sequence; Allele; Transcription (linguistics); Molecular biology; Mutant; Genome","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001693507,0.0001113244,0.0001951305,0.00002249959,0.00004989009,0.0000112236,0.0001002,0.0000528714,0.0001115153],"category_scores_gemma":[0.000009240421,0.00004941355,0.00003901308,0.0003120412,0.00002742621,0.00006163371,0.00001099271,0.00005707109,0.00001365996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003013008,"about_ca_system_score_gemma":0.00002019462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005746039,"about_ca_topic_score_gemma":0.0004691629,"domain_scores_codex":[0.999074,0.00003981635,0.0002829679,0.000218761,0.000179375,0.0002050108],"domain_scores_gemma":[0.9997189,0.00001786783,0.00005298253,0.00004080053,0.00009965986,0.00006980066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005058113,0.00007193356,0.00412142,0.000008139906,0.00001992718,0.000001625846,0.004387473,0.0000627589,0.9897646,0.000003092965,0.00002987267,0.001478593],"study_design_scores_gemma":[0.0009496412,0.0006556045,0.6686103,0.00002183539,0.00003544928,0.000004321644,0.00251324,0.0002447451,0.3200918,0.0001582876,0.006400695,0.0003140374],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981064,0.0005063068,0.00003235203,0.0005585535,0.00006702589,0.0002501063,0.0002507242,0.00002590215,0.0002025965],"genre_scores_gemma":[0.9990012,0.00009481482,0.0001694695,0.0001724101,0.00005876706,0.00001299244,0.0001898324,0.000001008895,0.000299471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6696727,"threshold_uncertainty_score":0.2015026,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05925748087533504,"score_gpt":0.2299666321525068,"score_spread":0.1707091512771717,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}