{"id":"W2229126747","doi":"10.1200/jco.2012.30.30_suppl.37","title":"Discovery of a biomarker signature that predicts upgrading or upstaging in patients with low-risk prostate cancer.","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia","funders":"","keywords":"Medicine; Prostate cancer; Prostatectomy; Stage (stratigraphy); Biomarker; Oncology; Receiver operating characteristic; Cancer; Biopsy; Prostate; Internal medicine; Urology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003292798,0.000192508,0.0005128733,0.0005787205,0.0001834259,0.0005869164,0.0001711603,0.0003106517,0.0007086155],"category_scores_gemma":[0.0008268192,0.0001151187,0.0002925991,0.0006783446,0.0001568181,0.0001578493,0.0002574307,0.0003393681,0.0003391018],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002055616,"about_ca_system_score_gemma":0.0002838268,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009933913,"about_ca_topic_score_gemma":0.001516879,"domain_scores_codex":[0.9997959,0.0000274715,0.00001828203,0.00006906295,0.00005127293,0.00003817639],"domain_scores_gemma":[0.9996029,0.00009644288,0.0001287981,0.00002770856,0.00007684903,0.0000673802],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009405782,0.0001802854,0.8637478,0.0001087247,0.0001252141,0.0001918817,0.0001255497,0.001194136,0.1096711,0.0000485688,0.000624673,0.02304146],"study_design_scores_gemma":[0.00002163887,0.0005349772,0.979386,0.00001215005,0.00009954021,0.0006610199,0.000151411,0.006521678,0.01154288,0.0001296998,0.0009226245,0.00001633102],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997201,0.0003009003,0.000748284,0.00006002405,0.00000666422,0.00001776732,0.001430642,0.00002115317,0.0002136403],"genre_scores_gemma":[0.9957923,0.00006903942,0.001562016,0.00003614522,0.000005449675,0.00001699802,0.002352615,0.00000406967,0.0001612652],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009933913,"threshold_uncertainty_score":0.002370536,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08199600246753193,"score_gpt":0.4467075778286942,"score_spread":0.3647115753611623,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}