{"id":"W2231041248","doi":"10.1128/genomea.00760-15","title":"Complete Genome Sequence of Phytopathogenic Pectobacterium atrosepticum Bacteriophage Peat1","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Lethbridge College","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Biology; Blackleg; Bacteriophage; Genome; Whole genome sequencing; Podoviridae; Microbiology; Pectobacterium; Virology; Genetics; Pathogen; Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002433119,0.0002697399,0.0003194787,0.00005916095,0.0001247763,0.0000609342,0.0004842912,0.00006771227,0.004225478],"category_scores_gemma":[0.00001510511,0.0002681345,0.0001372948,0.0002943679,0.000227602,0.0004844566,0.0004426011,0.0001469242,0.002540492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004448056,"about_ca_system_score_gemma":0.00004227544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003690956,"about_ca_topic_score_gemma":0.00007480355,"domain_scores_codex":[0.9981244,0.00006802683,0.0004775372,0.0004698529,0.0003371402,0.000523098],"domain_scores_gemma":[0.998899,0.00001009974,0.0002557146,0.0005226189,0.00005888483,0.0002536304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000435589,0.0001195147,0.002177222,0.00001238719,0.00003043333,0.00001959832,0.0007548507,0.0001087041,0.9962339,0.000004920182,0.000223383,0.0002714761],"study_design_scores_gemma":[0.001200758,0.0006039532,0.3402309,0.00002505416,0.00007490081,0.0001154147,0.0003417389,0.00006001086,0.002709068,0.00006501356,0.6539305,0.0006426191],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864442,0.00008907474,0.0002500529,0.00008346601,0.0006676011,0.000360685,0.001570028,0.00004854551,0.0104863],"genre_scores_gemma":[0.9928252,0.00004088846,0.001330699,0.0003291476,0.0001228185,0.00002717798,0.0006601154,0.00003247796,0.004631439],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9935249,"threshold_uncertainty_score":0.9999771,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04918726342968001,"score_gpt":0.2614673533360462,"score_spread":0.2122800899063662,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}