{"id":"W2232856929","doi":"10.1101/gr.196139.115","title":"Pervasive polymorphic imprinted methylation in the human placenta","year":2016,"lang":"en","type":"article","venue":"Genome Research","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":143,"is_retracted":false,"has_abstract":true,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Medical Research Council; Canadian Institutes of Health Research; Child and Family Research Institute","keywords":"Differentially methylated regions; Genomic imprinting; Biology; DNA methylation; Imprinting (psychology); Methylation; Germline; Epigenetics; Genetics; Bisulfite sequencing; Placenta; Gene; Gene expression; Fetus; Pregnancy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001800198,0.0001008387,0.0001663091,0.0004477209,0.0001128305,0.0003259124,0.0001316893,0.00011913,0.0006007098],"category_scores_gemma":[0.0003536086,0.0001524973,0.0001290539,0.0005171874,0.0001975895,0.00009076154,0.000254899,0.0001526162,0.0001452415],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001960353,"about_ca_system_score_gemma":0.0001962992,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002099374,"about_ca_topic_score_gemma":0.002371227,"domain_scores_codex":[0.9998434,0.00002868092,0.000008167439,0.00006241619,0.00004170622,0.0000156288],"domain_scores_gemma":[0.9998908,0.00002334759,0.00004350156,0.00001624332,0.00001450097,0.00001155301],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004898955,0.00001217124,0.1196944,0.0002131365,0.0001753885,0.00103996,0.0005545047,0.0006491577,0.8336906,0.0008520267,0.0004901324,0.04213869],"study_design_scores_gemma":[0.00002473861,0.0001818991,0.838213,0.00003605617,0.0001592332,0.005546971,0.0002363121,0.001891103,0.1402928,0.001370523,0.01202477,0.00002256557],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9781755,0.009096596,0.008524323,0.0001259116,0.0000122093,0.00001970925,0.001610229,0.0001670131,0.00226852],"genre_scores_gemma":[0.9947478,0.001781063,0.002435424,0.00003721804,0.000004849416,0.000008035481,0.0005147787,0.00001725183,0.0004534788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002099374,"threshold_uncertainty_score":0.004174352,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06737292024968491,"score_gpt":0.3631432697790212,"score_spread":0.2957703495293363,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}