{"id":"W2234918901","doi":"10.1094/pdis-07-15-0763-re","title":"Identification of the Dominant Genotypes of <i>Phytophthora infestans</i> in Canada Using Real-Time PCR with ASO-PCR Assays","year":2016,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Association of Friendship Centres; Cégep Saint-Jean-sur-Richelieu; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","keywords":"Phytophthora infestans; Biology; Oomycete; Blight; Genotype; Metalaxyl; Genetics; Fungicide; Genetic diversity; Polymerase chain reaction; Single-nucleotide polymorphism; Gene; Botany; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001125481,0.00007684693,0.0001319566,0.000006925169,0.00004998541,0.000005565927,0.0001585479,0.0000197782,0.000023148],"category_scores_gemma":[0.00004408169,0.00001979944,0.00003105207,0.0001593366,0.00004669582,0.00004607506,0.00002283464,0.00002356994,9.049941e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006701931,"about_ca_system_score_gemma":0.0001779858,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.09819703,"about_ca_topic_score_gemma":0.3772133,"domain_scores_codex":[0.9992355,0.0000611832,0.000210368,0.0001426209,0.0002111554,0.0001392452],"domain_scores_gemma":[0.9995013,0.000122962,0.00018054,0.00007528797,0.00005499959,0.00006492556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001411503,0.00002528389,0.07949066,0.00001596966,0.000004241958,0.00001865393,0.000002950896,0.00002151765,0.9197755,0.00003776877,0.00007622683,0.0003900994],"study_design_scores_gemma":[0.0001070711,0.00001345642,0.9471847,0.0001918625,0.00002189951,0.000002822844,0.00002742286,0.0001339885,0.05191975,0.00005329482,0.0002538271,0.0000899178],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964679,0.00008594973,0.00000221408,0.0001239394,0.00004717952,0.0001260374,0.003075175,0.000003221912,0.00006837027],"genre_scores_gemma":[0.9997777,0.00007332451,0.00001098639,0.0000125413,0.00002277396,0.000003398055,0.00002202505,6.693275e-7,0.0000765755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8678557,"threshold_uncertainty_score":0.9078082,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00935442760438912,"score_gpt":0.1775350708996165,"score_spread":0.1681806432952274,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}