{"id":"W2234918901","doi":"10.1094/pdis-07-15-0763-re","title":"Identification of the Dominant Genotypes of <i>Phytophthora infestans</i> in Canada Using Real-Time PCR with ASO-PCR Assays","year":2016,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Association of Friendship Centres; Cégep Saint-Jean-sur-Richelieu; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","keywords":"Phytophthora infestans; Biology; Oomycete; Blight; Genotype; Metalaxyl; Genetics; Fungicide; Genetic diversity; Polymerase chain reaction; Single-nucleotide polymorphism; Gene; Botany; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002253807,0.0004207021,0.0003484486,0.001061151,0.001061524,0.0009892635,0.000464646,0.0002920771,0.0009053395],"category_scores_gemma":[0.0003806799,0.0002803168,0.0003209561,0.001240935,0.0004944977,0.00012355,0.0003049757,0.0003956035,0.0002515799],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.006281822,"about_ca_system_score_gemma":0.006798855,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8666484,"about_ca_topic_score_gemma":0.9365277,"domain_scores_codex":[0.999338,0.00002421203,0.00002052037,0.0002156997,0.0002502263,0.0001514705],"domain_scores_gemma":[0.9995145,0.00003682159,0.00009599244,0.00001517344,0.0002774562,0.00006004911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004070238,0.00006873067,0.06934804,0.0001384825,0.00004295911,0.0003004679,0.001123252,0.0005162301,0.9042322,0.0004327072,0.0007611449,0.02262872],"study_design_scores_gemma":[0.00003105422,0.0002569561,0.8315284,0.00006568852,0.0001397622,0.0005756178,0.002600612,0.004751439,0.1356222,0.0001634946,0.02418311,0.00008166878],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9773137,0.0007962452,0.007117282,0.0001816362,0.00002197233,0.0002045758,0.007796777,0.000224695,0.006343068],"genre_scores_gemma":[0.9574381,0.000940377,0.02196971,0.0002630614,0.000005950298,0.0001433192,0.008290357,0.00007796499,0.01087119],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1333516,"threshold_uncertainty_score":0.2682738,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00935442760438912,"score_gpt":0.1775350708996165,"score_spread":0.1681806432952274,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}