{"id":"W2235027711","doi":"10.1650/0010-5422(2005)107[0514:mgefpe]2.0.co;2","title":"MULTIPLE GENE EVIDENCE FOR PARALLEL EVOLUTION AND RETENTION OF ANCESTRAL MORPHOLOGICAL STATES IN THE SHANKS (CHARADRIIFORMES: SCOLOPACIDAE)","year":2005,"lang":"en","type":"article","venue":"Ornithological Applications","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"National Science Foundation","keywords":"Charadriiformes; Phylogenetic tree; Biology; Maximum parsimony; Zoology; Mitochondrial DNA; Evolutionary biology; Phylogenetics; Taxon; Maximum likelihood; Ecology; Gene; Genetics; Clade; Statistics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003063651,0.0002153696,0.0001980002,0.001043574,0.0004632907,0.0004494021,0.0002508816,0.0002412599,0.001292899],"category_scores_gemma":[0.000603167,0.0001946746,0.0002153827,0.0007666806,0.0007377706,0.000199848,0.0004282495,0.0003698302,0.0002111694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006136362,"about_ca_system_score_gemma":0.0004871489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004512002,"about_ca_topic_score_gemma":0.01200469,"domain_scores_codex":[0.9998621,0.00002820568,0.000009525797,0.00004354663,0.000030584,0.00002600668],"domain_scores_gemma":[0.9993538,0.0002021734,0.0001811808,0.000052182,0.00009920618,0.0001113951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001161303,0.0000648081,0.6798151,0.0002118157,0.000188766,0.001075364,0.002688568,0.001674256,0.2760039,0.0006186785,0.0000798347,0.03641766],"study_design_scores_gemma":[0.00001776881,0.0001066884,0.9945434,0.00001589093,0.00004010294,0.0003977187,0.0003604101,0.001707847,0.002254426,0.0001567539,0.0003882,0.00001085094],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999358,0.0000537919,0.0001955801,0.000009953833,7.897033e-7,0.000001611262,0.00003076588,0.000007331325,0.0003421735],"genre_scores_gemma":[0.9992912,0.00003950273,0.0003621284,0.000006757966,0.000001509725,0.000004206004,0.000134466,0.000002949435,0.0001572716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004512002,"threshold_uncertainty_score":0.008971512,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05937165947083164,"score_gpt":0.3032419639205293,"score_spread":0.2438703044496976,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}