{"id":"W2235560899","doi":"10.1128/genomea.01507-15","title":"Genome Sequence of Listeria monocytogenes Strain F6540 (Sequence Type 360) Collected from Food Samples in Ontario, Canada","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Listeria monocytogenes; Biology; Virulence; Whole genome sequencing; Strain (injury); Genome; Genetics; Sequence analysis; Sequence (biology); Microbiology; Listeria; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001568109,0.0003956855,0.0003531722,0.001787998,0.001584239,0.0005649385,0.0003125976,0.0002527387,0.001427507],"category_scores_gemma":[0.0004161137,0.0002306729,0.0003615009,0.004599844,0.0003285476,0.0001261367,0.0004073,0.0003747974,0.0003997266],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.008206184,"about_ca_system_score_gemma":0.01815149,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9682041,"about_ca_topic_score_gemma":0.9768823,"domain_scores_codex":[0.9997073,0.000006417971,0.00001455286,0.00005869128,0.0001472754,0.00006569533],"domain_scores_gemma":[0.9994835,0.00001838239,0.00007496635,0.00001184224,0.0003112059,0.0001001266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002359584,0.0002179319,0.269274,0.001882965,0.0001728659,0.002863121,0.007663565,0.001677253,0.6023066,0.0008395151,0.02650624,0.08423633],"study_design_scores_gemma":[0.00003500968,0.0001111313,0.9425574,0.0001178355,0.00007328654,0.0004414398,0.002490433,0.0003373001,0.005729654,0.00005083483,0.04802145,0.00003428352],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.797242,0.002869548,0.001311554,0.0005682889,0.00007560526,0.0002419477,0.1841408,0.0001439535,0.01340611],"genre_scores_gemma":[0.7943782,0.004136627,0.007116455,0.0005179368,0.00002034827,0.0001129672,0.1792492,0.0000787007,0.0143895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03179586,"threshold_uncertainty_score":0.06396616,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1250352706334692,"score_gpt":0.2940407032807968,"score_spread":0.1690054326473276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}