{"id":"W2236347524","doi":"10.1128/genomea.00539-15","title":"Complete Genome Sequence of Escherichia coli O145:NM Bacteriophage vB_EcoM_AYO145A, a New Member of O1-Like Phages","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture Food and Rural Development; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; China Scholarship Council; Ministry of Education, India","keywords":"Myoviridae; Bacteriophage; Escherichia coli; Biology; Genome; Capsid; Whole genome sequencing; Virology; Genetics; Microbiology; Virus; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002725196,0.0002978743,0.0004567439,0.00007198258,0.00009768159,0.00004346035,0.000577462,0.00009186899,0.007087546],"category_scores_gemma":[0.00001850503,0.0002982705,0.0001379089,0.0004050227,0.0002712089,0.0005185789,0.0004633287,0.0001625386,0.001031824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003069544,"about_ca_system_score_gemma":0.00009377972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002669925,"about_ca_topic_score_gemma":0.0002228512,"domain_scores_codex":[0.9979119,0.00007214292,0.0006695556,0.0004606365,0.0003951423,0.0004906614],"domain_scores_gemma":[0.9986001,0.00002046557,0.0004449814,0.0005483353,0.00007002095,0.0003160977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006689617,0.0001877466,0.00153958,0.00002521126,0.0000696823,0.000008159585,0.001235992,0.0002377674,0.9944029,0.000008084071,0.001761543,0.0004564075],"study_design_scores_gemma":[0.001896286,0.0006358979,0.1256652,0.00005178129,0.0001059391,0.00002840864,0.0004180963,0.0001028914,0.008245588,0.0001300757,0.8620849,0.0006349662],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985783,0.0001882132,0.0003805221,0.0001076592,0.000657691,0.0004664975,0.001078606,0.00003376363,0.01130408],"genre_scores_gemma":[0.981468,0.00009159937,0.003738787,0.0004927915,0.00009708641,0.00002096591,0.0003915472,0.00003977864,0.0136594],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9861574,"threshold_uncertainty_score":0.999947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06337454935512742,"score_gpt":0.2760698569249966,"score_spread":0.2126953075698692,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}