{"id":"W2236950025","doi":"10.1128/genomea.01526-15","title":"Complete Genome and Plasmid Sequences of Three Canadian Isolates of Salmonella enterica subsp. <i>enterica</i> Serovar Heidelberg from Human and Food Sources","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ste. Anne's Hospital; Toronto Public Health; Canadian Science Centre for Human and Animal Health; University of Manitoba; Public Health Agency of Canada","funders":"Génome Québec; Institut National de Santé Publique du Québec; Public Health Agency of Canada; Government of Canada; McGill University","keywords":"Salmonella enterica; Plasmid; Serotype; Biology; Genome; Microbiology; Salmonella; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007662112,0.000179084,0.0002573462,0.00005419997,0.0001654634,0.00003128739,0.0002229911,0.00004859011,0.00133041],"category_scores_gemma":[0.000003274005,0.0001421626,0.0000437328,0.00008692893,0.0003785995,0.0002239686,0.0002157141,0.00005171835,0.000043478],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009939371,"about_ca_system_score_gemma":0.00001427317,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.06652141,"about_ca_topic_score_gemma":0.05713755,"domain_scores_codex":[0.9988455,0.00002804013,0.0003565405,0.0003456792,0.0001176899,0.0003065828],"domain_scores_gemma":[0.999368,0.0000262624,0.0002095099,0.0002100416,0.00001880692,0.0001674383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000142544,0.00003260896,0.04820696,0.000009528877,0.00006509665,0.000001616145,0.0004647255,0.0000043872,0.950785,0.000004196213,0.00004366476,0.0003679344],"study_design_scores_gemma":[0.001194756,0.00116355,0.8915055,0.000124411,0.00008629353,0.00002578274,0.00038393,0.00002053483,0.01198266,0.0005004168,0.09246716,0.0005450056],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962838,0.0003413791,0.0001029382,0.0002030183,0.00006356487,0.0001731494,0.002219876,0.000008661561,0.0006036656],"genre_scores_gemma":[0.9989213,0.0002443417,0.000416459,0.0001568279,0.0000221534,0.000007414626,0.0000691198,0.00001379511,0.0001485982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9388024,"threshold_uncertainty_score":0.9995825,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01858319178604463,"score_gpt":0.2071919246679071,"score_spread":0.1886087328818624,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}