{"id":"W2237255049","doi":"10.1128/genomea.01210-15","title":"Draft Genome Sequence of Salmonella enterica subsp. <i>enterica</i> Serovar Mishmarhaemek Isolated from Bovine Feces","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Government of Canada; Canadian Food Inspection Agency","funders":"Addis Ababa University; Canadian Food Inspection Agency","keywords":"Salmonella enterica; Biology; Serotype; Feces; Whole genome sequencing; Salmonella; Microbiology; Genome; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004686712,0.0003694214,0.0006409995,0.00003008447,0.0001272328,0.00005338033,0.0008055602,0.0001708877,0.0007077508],"category_scores_gemma":[0.00005896978,0.0001810891,0.0001671145,0.0005297145,0.0001823715,0.0002100338,0.0003082466,0.0001613261,0.0003196441],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001067662,"about_ca_system_score_gemma":0.00003243109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001970757,"about_ca_topic_score_gemma":0.0001141651,"domain_scores_codex":[0.9971299,0.0002650006,0.000773756,0.0007186887,0.0004236301,0.0006890432],"domain_scores_gemma":[0.9985926,0.000121315,0.0004441762,0.0002400674,0.000258734,0.0003430969],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003212083,0.0002161178,0.06135126,0.000009509477,0.0001153998,0.00003118753,0.0003783763,0.00001327691,0.9343187,0.000005030192,0.001089472,0.002150527],"study_design_scores_gemma":[0.001829862,0.004495083,0.2788775,0.00008014134,0.0001525182,0.00005815249,0.001689783,0.0002828522,0.001947062,0.001322142,0.7078738,0.001391173],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939885,0.001492946,0.00006280752,0.0006432441,0.0004621018,0.0003266675,0.001559382,0.00009134666,0.001373015],"genre_scores_gemma":[0.9935096,0.0004633879,0.000308692,0.00133793,0.0003306051,0.00002683707,0.003283218,0.000004924335,0.000734825],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9323716,"threshold_uncertainty_score":0.7749375,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.064439673872817,"score_gpt":0.2551611119460034,"score_spread":0.1907214380731864,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}