{"id":"W2237593570","doi":"10.1371/journal.pone.0146510","title":"Gardnerella vaginalis Subgroups Defined by cpn60 Sequencing and Sialidase Activity in Isolates from Canada, Belgium and Kenya","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Manitoba","keywords":"Gardnerella vaginalis; Sialidase; Biology; Microbiology; Bacterial vaginosis; Genetics; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002502886,0.0004609832,0.0003784156,0.001950549,0.001501615,0.0008566093,0.0003136099,0.0003770868,0.0004742605],"category_scores_gemma":[0.001087373,0.0002636925,0.0003492018,0.002562136,0.0005298253,0.0001505884,0.0005473183,0.000273555,0.0001401379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003160309,"about_ca_system_score_gemma":0.005721009,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8228806,"about_ca_topic_score_gemma":0.832545,"domain_scores_codex":[0.9994797,0.00002697399,0.00004561059,0.0001211139,0.0001242635,0.0002023538],"domain_scores_gemma":[0.9994953,0.000044565,0.00008599062,0.00002171873,0.0002041503,0.00014831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001258955,0.00008079403,0.8540024,0.0003550384,0.0001447575,0.002727513,0.006159557,0.0007206638,0.1075184,0.00026379,0.001030316,0.02573784],"study_design_scores_gemma":[0.0000135274,0.0000651628,0.9871962,0.00007526797,0.00005866092,0.001252604,0.003976671,0.0003597518,0.003419442,0.00003117349,0.00352888,0.00002271215],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962191,0.0005938767,0.0001229106,0.00004063325,0.000005795505,0.00005101555,0.00169485,0.000008232518,0.001263576],"genre_scores_gemma":[0.9943873,0.0006277131,0.001143376,0.00007270153,0.000003661103,0.00002376146,0.003136448,0.00001233144,0.0005928107],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1771194,"threshold_uncertainty_score":0.3563249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02773733215046826,"score_gpt":0.2247119387112756,"score_spread":0.1969746065608073,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}