{"id":"W2237593570","doi":"10.1371/journal.pone.0146510","title":"Gardnerella vaginalis Subgroups Defined by cpn60 Sequencing and Sialidase Activity in Isolates from Canada, Belgium and Kenya","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Manitoba","keywords":"Gardnerella vaginalis; Sialidase; Biology; Microbiology; Bacterial vaginosis; Genetics; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002297865,0.0001465467,0.0002720719,0.00009061453,0.0001239063,0.00001998777,0.00008165057,0.0001338279,0.000237338],"category_scores_gemma":[0.0004026225,0.000115342,0.00001385065,0.000108355,0.000209611,0.0001482419,0.0000869043,0.0002729651,0.00002851834],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000238216,"about_ca_system_score_gemma":0.0001742572,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5112399,"about_ca_topic_score_gemma":0.1985004,"domain_scores_codex":[0.9987724,0.0002489732,0.0001511317,0.0004402123,0.00005380761,0.0003334253],"domain_scores_gemma":[0.9990178,0.0005456237,0.000053588,0.0002671744,0.00007320246,0.00004262283],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001034566,0.0002537604,0.1305655,0.00001726848,0.0001747496,0.000005992943,0.0001010151,7.534836e-8,0.8672549,0.00001799516,0.000546446,0.0009589331],"study_design_scores_gemma":[0.00101332,0.0001176443,0.1074261,0.00008940517,0.00004101915,0.00001260414,0.00006407753,0.000003211408,0.8903145,0.0002022522,0.0005320698,0.000183833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957133,0.001907105,0.00001901494,0.001613839,0.00006076685,0.00020792,0.0002003431,0.00002751281,0.0002501841],"genre_scores_gemma":[0.9984814,0.0003536066,0.00005699797,0.00003426285,0.00002731727,0.00002512848,0.0000247087,0.00001557247,0.0009809859],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3127395,"threshold_uncertainty_score":0.8161249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02773733215046826,"score_gpt":0.2247119387112756,"score_spread":0.1969746065608073,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}