{"id":"W2237652898","doi":"10.1128/aac.01692-15","title":"Novel Type XII Staphylococcal Cassette Chromosome <i>mec</i> Harboring a New Cassette Chromosome Recombinase, CcrC2","year":2015,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Recombinase; Extrachromosomal DNA; Gene cassette; Biology; Genetics; Gene; Chromosome; SCCmec; Insertion sequence; Plasmid; Staphylococcus aureus; Transposable element; Genome; Integron; Methicillin-resistant Staphylococcus aureus; Recombination; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001156788,0.0004098123,0.0003715124,0.0004244598,0.0001640284,0.0005209285,0.0002955395,0.0004091244,0.000791263],"category_scores_gemma":[0.0003156559,0.0001499879,0.0002989547,0.0002894149,0.0002175921,0.0001745871,0.000244636,0.0006163427,0.0002621026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001991641,"about_ca_system_score_gemma":0.0002387089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006793387,"about_ca_topic_score_gemma":0.0006929688,"domain_scores_codex":[0.9997975,0.00002589418,0.00002354903,0.00005071861,0.00006426565,0.00003805185],"domain_scores_gemma":[0.9997875,0.00003778146,0.0000757286,0.00002517575,0.00002213038,0.00005164828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000148407,0.00007143422,0.01081382,0.00006338554,0.00002249812,0.002649369,0.00006852382,0.00009202097,0.9796528,0.0002288809,0.0001435516,0.006045278],"study_design_scores_gemma":[0.0001402858,0.001763176,0.1843932,0.00005526657,0.000154906,0.1245454,0.0002906568,0.003219437,0.6569876,0.0003139456,0.02806295,0.00007328372],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993044,0.0006296757,0.004575784,0.0001024971,0.00003872376,0.00004809416,0.0002315929,0.000039994,0.001289607],"genre_scores_gemma":[0.9894273,0.0003541528,0.006513513,0.00009604042,0.00003380189,0.00002691347,0.001418005,0.00001827838,0.002112003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000791263,"threshold_uncertainty_score":0.002646983,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04057335043309845,"score_gpt":0.2904353296654048,"score_spread":0.2498619792323064,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}