{"id":"W2240081306","doi":"10.3767/003158515x689135","title":"One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes","year":2015,"lang":"en","type":"article","venue":"Persoonia - Molecular Phylogeny and Evolution of Fungi","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":571,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Biodiversity Monitoring Institute; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; King Abdulaziz University; Medical Research Council; Alfred P. Sloan Foundation","keywords":"Biology; Primer (cosmetics); Genetics; Ribosomal RNA; Gene; Elongation factor; Internal transcribed spacer; RNA; Polymerase chain reaction; Molecular biology; Computational biology; Ribosome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002965739,0.001060612,0.001160746,0.0009765681,0.0004086837,0.001152986,0.0008777702,0.00136152,0.001988748],"category_scores_gemma":[0.005455768,0.000877014,0.000726768,0.0006649104,0.001050868,0.001157037,0.0009714016,0.001280206,0.001182483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005835732,"about_ca_system_score_gemma":0.001026679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004188975,"about_ca_topic_score_gemma":0.001763809,"domain_scores_codex":[0.9956445,0.0009543534,0.0002909614,0.001912954,0.0008499973,0.0003474656],"domain_scores_gemma":[0.9958929,0.001668082,0.0009490128,0.0002600015,0.001022931,0.0002070587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002843928,0.00009768819,0.008995987,0.0009513484,0.00005274322,0.0001394347,0.0003555475,0.0005100503,0.9363688,0.001287646,0.0001922574,0.05076394],"study_design_scores_gemma":[0.00004073676,0.0009492255,0.01239579,0.0002697111,0.00017294,0.0009404178,0.0003446711,0.005739844,0.9633186,0.000978838,0.01479725,0.00005200997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.5936671,0.01225783,0.385225,0.0005883142,0.00027149,0.001007275,0.001659379,0.0007744278,0.004549032],"genre_scores_gemma":[0.4101638,0.003297431,0.5794495,0.0006347238,0.00004872352,0.000774261,0.001949672,0.0001855354,0.003496362],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.002965739,"threshold_uncertainty_score":0.01568449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01620593267873868,"score_gpt":0.2241633738851702,"score_spread":0.2079574412064315,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}