{"id":"W2249272124","doi":"10.1128/genomea.01511-15","title":"Permanent Draft Genome Sequence of<i>Frankia</i>sp. Strain AvcI1, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of<i>Alnus viridis</i>subsp.<i>crispa</i>Grown in Canada","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Frankia; Biology; Strain (injury); Root nodule; Botany; Whole genome sequencing; Betulaceae; Genome; Gene; Nitrogen fixation; Microbiology; Bacteria; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005423819,0.00197259,0.001672961,0.002630635,0.001531626,0.001311107,0.001209866,0.001185138,0.005899183],"category_scores_gemma":[0.00179453,0.0006551732,0.001363436,0.005890658,0.0004057534,0.0005996539,0.0007237032,0.002389991,0.005373121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001575509,"about_ca_system_score_gemma":0.007234044,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05010088,"about_ca_topic_score_gemma":0.04778765,"domain_scores_codex":[0.9996783,0.00001940657,0.00003583502,0.0001048675,0.0001060168,0.00005555017],"domain_scores_gemma":[0.9986658,0.0002124345,0.0002613518,0.00007659123,0.0005222312,0.000261628],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003847268,0.0003705439,0.009037573,0.009529161,0.0003807443,0.002757873,0.001509041,0.001841764,0.8554971,0.001233615,0.053846,0.06014941],"study_design_scores_gemma":[0.001072212,0.001193013,0.2252017,0.001769815,0.002975441,0.003441322,0.001937599,0.00451653,0.1146482,0.002143905,0.6406233,0.0004770431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1057873,0.00566862,0.0158193,0.001039192,0.0007811397,0.0004680741,0.8612347,0.002805911,0.006395789],"genre_scores_gemma":[0.025623,0.001858508,0.01628337,0.0001168943,0.00007333485,0.0001880142,0.9528525,0.0003890319,0.002615231],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.9498991,"threshold_uncertainty_score":0.09961855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02591915251614486,"score_gpt":0.2126418253369254,"score_spread":0.1867226728207805,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}