{"id":"W2252311410","doi":"10.1186/s12862-016-0594-3","title":"Emergence and evolution of yeast prion and prion-like proteins","year":2016,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Saccharomyces cerevisiae; Genetics; Amyloid (mycology); Population; Phenotype; Genome; Yeast; Gene; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001777658,0.0001985884,0.0001146328,0.0003955118,0.0003286946,0.000461327,0.0001576599,0.0003100475,0.000272396],"category_scores_gemma":[0.000342598,0.00008408404,0.0001750393,0.0004673799,0.0002798642,0.0003102663,0.000446253,0.0003233122,0.0001871898],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002968852,"about_ca_system_score_gemma":0.0001923613,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007868449,"about_ca_topic_score_gemma":0.0008397211,"domain_scores_codex":[0.999931,0.000009277913,0.000006162613,0.00002377786,0.0000176711,0.00001206603],"domain_scores_gemma":[0.9997292,0.00004215771,0.0001037927,0.00002632743,0.00004248504,0.00005602466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005621632,0.00009988815,0.1228871,0.0003825029,0.0000696536,0.001652017,0.0004966602,0.00246497,0.8255417,0.00525582,0.0005936653,0.03999399],"study_design_scores_gemma":[0.00007479602,0.0005792046,0.6860797,0.0001764016,0.0001582106,0.01065124,0.001076126,0.01062668,0.2406943,0.009901806,0.03987181,0.0001096506],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917397,0.003298379,0.002581764,0.00007370868,0.00001153997,0.00001123792,0.0005013526,0.00005829602,0.001723922],"genre_scores_gemma":[0.9924594,0.001739698,0.004204866,0.000082092,0.00001038268,0.00001214762,0.001050494,0.00001972152,0.0004211755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007868449,"threshold_uncertainty_score":0.002154112,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009312892834630252,"score_gpt":0.2408957101034314,"score_spread":0.2315828172688012,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}