{"id":"W2262352079","doi":"10.1038/srep10241","title":"Lung microbiota across age and disease stage in cystic fibrosis","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":398,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; St. Michael's Hospital; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada; National Sanitarium Association","keywords":"Cystic fibrosis; Biology; Prevotella; Veillonella; Actinomyces; Stenotrophomonas; Lung; Fusobacterium; Burkholderia cepacia complex; Burkholderia; Streptococcus; Microbiology; Pseudomonas; Medicine; Internal medicine; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003033535,0.0001575678,0.0002715838,0.0007450319,0.0003714265,0.0003713985,0.0001206244,0.0004032697,0.000580231],"category_scores_gemma":[0.00120124,0.0001584689,0.0002004338,0.0004750603,0.0002753946,0.0004110617,0.000415345,0.0002567951,0.0001502419],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003224995,"about_ca_system_score_gemma":0.0002005675,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00554265,"about_ca_topic_score_gemma":0.00746584,"domain_scores_codex":[0.9996655,0.00008446082,0.00002002937,0.00007629111,0.00005284299,0.0001009829],"domain_scores_gemma":[0.9995671,0.00007357422,0.0001701605,0.00001966624,0.00006287611,0.000106563],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003835478,0.00004612771,0.9874092,0.00001277365,0.00002328518,0.0001681207,0.0004137328,0.00006260154,0.006793492,0.00001404596,0.00007193336,0.004601101],"study_design_scores_gemma":[0.000001937002,0.0001016733,0.9991555,0.00000271816,0.000007375207,0.0001730114,0.0002534848,0.00005879879,0.0001727848,0.00001204961,0.00005844887,0.000002142966],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996631,0.0001598568,0.00002882081,0.00001172657,0.000001152315,0.000002564355,0.00005232115,7.359237e-7,0.00007966178],"genre_scores_gemma":[0.9995356,0.0001393114,0.00008258542,0.00001669012,0.000003575976,0.000003326362,0.0001114554,7.634618e-7,0.0001068165],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00554265,"threshold_uncertainty_score":0.01102072,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02283793007651026,"score_gpt":0.3366200196633862,"score_spread":0.313782089586876,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}