{"id":"W2264932884","doi":"10.1038/srep09934","title":"Promoter-Autonomous Functioning in a Controlled Environment using Single Molecule FISH","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Promoter; Gene; Biology; Transcription (linguistics); ENCODE; Locus (genetics); Genetics; Transcription factor; Transcriptional regulation; Computational biology; Regulation of gene expression; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006630394,0.0001160186,0.0001503599,0.00007747138,0.00006135712,0.00009212064,0.00006185901,0.00006934146,0.00001572904],"category_scores_gemma":[0.0001029343,0.0001158619,0.00006470871,0.00009889483,0.00005939809,0.000005070056,0.00008133247,0.00005196634,0.000003490445],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005743303,"about_ca_system_score_gemma":0.00009782345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001632437,"about_ca_topic_score_gemma":0.00002090837,"domain_scores_codex":[0.9987274,0.00002707282,0.000318882,0.0004915301,0.0001934733,0.0002415839],"domain_scores_gemma":[0.9993212,0.000002632671,0.00009866562,0.0004319461,0.00003901498,0.0001064888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003004558,0.00008941442,0.001498963,0.000005507809,0.0000137858,0.00009036597,0.0001129085,0.03006637,0.9669333,9.539995e-7,0.0007304827,0.0004279584],"study_design_scores_gemma":[0.002068497,0.0002250438,0.0004536324,0.00003093175,0.00002975153,0.0004328195,0.0001989115,0.009921731,0.9319406,0.0002063788,0.05409237,0.0003993044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9825746,0.0003767373,0.01423237,0.0000305909,0.001583686,0.0002946045,8.133979e-7,0.00001354397,0.0008929975],"genre_scores_gemma":[0.9970157,0.000001526475,0.001457378,0.0000226978,0.00008192403,0.00002178473,0.00004386753,0.0000156532,0.001339513],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05336189,"threshold_uncertainty_score":0.472471,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01571928031842138,"score_gpt":0.2553093678162854,"score_spread":0.239590087497864,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}