{"id":"W2266751245","doi":"10.1139/bcb-2016-0002","title":"Suggested alternative starch utilization system from the human gut bacterium <i>Bacteroides thetaiotaomicron</i>","year":2016,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; University of Waterloo; Canadian Institutes of Health Research; National Science Council","keywords":"Bacteroides thetaiotaomicron; Bacterial outer membrane; Periplasmic space; Bacteroides; Starch; Biochemistry; Biology; Polysaccharide; Bacteria; Glycan; Bacteroidaceae; Microbiome; Microbiology; Gene; Genetics; Escherichia coli; Glycoprotein","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001100399,0.0002776172,0.0001445019,0.0002566095,0.0001221896,0.0003739692,0.0001651991,0.0002737363,0.0006882551],"category_scores_gemma":[0.0001419323,0.00009360127,0.0002601788,0.0002191813,0.0001715336,0.0002133677,0.0002958163,0.0002096247,0.0003253304],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000125886,"about_ca_system_score_gemma":0.0002212973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007778036,"about_ca_topic_score_gemma":0.0003311286,"domain_scores_codex":[0.9999261,0.00001175679,0.00000662258,0.00002227229,0.00001542012,0.00001787957],"domain_scores_gemma":[0.9999255,0.00001014755,0.00002759215,0.000007436453,0.00001110087,0.00001833289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001865342,0.00002484856,0.009269628,0.00008946256,0.00001075247,0.000519659,0.00007631272,0.00008694782,0.9860207,0.0003722526,0.00009964406,0.003243265],"study_design_scores_gemma":[0.0000895608,0.001443529,0.2936234,0.0001000503,0.0001664825,0.01089552,0.001684292,0.005474345,0.670816,0.001978119,0.01367237,0.0000562183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99613,0.0006797133,0.002093004,0.0001469582,0.00001570484,0.000008837386,0.0002481897,0.000025991,0.0006515339],"genre_scores_gemma":[0.9943823,0.0003634958,0.00373571,0.00006294978,0.000009627275,0.000008609678,0.0009025146,0.000006181296,0.0005286893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007778036,"threshold_uncertainty_score":0.002302468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01602250141358219,"score_gpt":0.2547823638592661,"score_spread":0.2387598624456839,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}