{"id":"W2270974174","doi":"10.1038/hdy.2016.4","title":"The genome of an Encephalitozoon cuniculi type III strain reveals insights into the genetic diversity and mode of reproduction of a ubiquitous vertebrate pathogen","year":2016,"lang":"en","type":"article","venue":"Heredity","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"ca_institutions":"Carleton University; University of Ottawa; Canadian Institute for Advanced Research","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Genome; Genetics; Encephalitozoon cuniculi; Genetic diversity; Whole genome sequencing; Genome evolution; Gene; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009747966,0.0003271246,0.0002651449,0.0005157072,0.000357217,0.0003546496,0.000271617,0.0003759927,0.0003574285],"category_scores_gemma":[0.0003540326,0.0001154407,0.0002442673,0.0006146772,0.0002878529,0.0001540721,0.0002850618,0.0005299129,0.0001091329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003411919,"about_ca_system_score_gemma":0.0004033323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009080891,"about_ca_topic_score_gemma":0.009548786,"domain_scores_codex":[0.9999191,0.000008616712,0.000004785286,0.000024072,0.00002127111,0.0000222802],"domain_scores_gemma":[0.9997498,0.00008048136,0.00005164688,0.00003280221,0.00003063842,0.00005468848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004653191,0.00003969121,0.008131403,0.00006643681,0.0000316407,0.000260129,0.0001923544,0.0002302963,0.9853941,0.0001535862,0.00008170792,0.00495345],"study_design_scores_gemma":[0.00006854246,0.0009167478,0.7072155,0.00006271128,0.0003180745,0.002870593,0.001263317,0.003079811,0.2765839,0.0007213617,0.006837461,0.00006194504],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997386,0.0001809727,0.0006168574,0.0000361285,0.000008764076,0.00001125051,0.001189717,0.00001270021,0.0005575724],"genre_scores_gemma":[0.9920697,0.0003101976,0.002320657,0.00006484384,0.000007602838,0.00001934974,0.004609689,0.000023156,0.0005747254],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009080891,"threshold_uncertainty_score":0.01805604,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01395104881561612,"score_gpt":0.2435891449718077,"score_spread":0.2296380961561915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}