{"id":"W2271716517","doi":"10.1128/aem.02723-15","title":"Genomic Diversity of Phages Infecting Probiotic Strains of Lactobacillus paracasei","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas; Canada Research Chairs","keywords":"Lactobacillus paracasei; Probiotic; Biology; Microbiology; Lactobacillus; Bacteriophage; Genetics; Bacteria; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009844271,0.0001278238,0.0002081689,0.00002479384,0.00008232904,0.000003465457,0.0001102867,0.00008710753,0.0004633015],"category_scores_gemma":[0.000003205909,0.0001199509,0.00004226046,0.00003995798,0.0005169232,0.00005944816,0.000660996,0.00009627782,0.00007053233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008898228,"about_ca_system_score_gemma":0.000004478961,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003026051,"about_ca_topic_score_gemma":0.00004097046,"domain_scores_codex":[0.9993274,0.00002553816,0.0002074212,0.0002270128,0.00003056665,0.0001820601],"domain_scores_gemma":[0.9996367,0.00002095972,0.0001461761,0.0001236326,0.000001240976,0.00007127637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001963748,0.000117094,0.03108759,0.000008208238,0.00002223337,0.000001392341,0.000679208,0.00006956796,0.965832,0.00001724661,0.00008682367,0.002059029],"study_design_scores_gemma":[0.001858473,0.0004430198,0.5653157,0.0000157808,0.0001078771,0.0002219797,0.002417151,0.000019128,0.4244978,0.0001745771,0.004478475,0.0004500307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978138,0.00004821277,0.00004383678,0.00001782009,0.00006316359,0.0001707427,0.0001264731,0.000008935989,0.001707031],"genre_scores_gemma":[0.999376,0.00003782842,0.0003606722,0.00005887397,0.00001124281,0.000002424523,0.00005646748,0.000008005161,0.00008850043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5413342,"threshold_uncertainty_score":0.5072826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01394489783090552,"score_gpt":0.1972079759122515,"score_spread":0.183263078081346,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}