{"id":"W2272673806","doi":"10.1371/journal.pone.0144112","title":"Phylogeographic Structure of the White-Footed Mouse and the Deer Mouse, Two Lyme Disease Reservoir Hosts in Québec","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Ministère des Ressources naturelles et des Forêts; Université de Montréal","funders":"Université de Montréal; Génome Québec; Institut National de Santé Publique du Québec; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Peromyscus; Phylogeography; Biology; Borrelia burgdorferi; Lyme disease; Deer mouse; Zoology; Genetic structure; Range (aeronautics); Ecology; Evolutionary biology; Phylogenetics; Genetic variation; Genetics; Gene; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003695659,0.0001763359,0.0002016582,0.001292215,0.001052335,0.0007278752,0.0004531054,0.0002514717,0.001940821],"category_scores_gemma":[0.0008167049,0.0001076284,0.0001571903,0.00144523,0.0003993874,0.0001627052,0.0002875932,0.0002411521,0.000128767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007727413,"about_ca_system_score_gemma":0.003079731,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9672184,"about_ca_topic_score_gemma":0.9855499,"domain_scores_codex":[0.9997903,0.00003091344,0.000008004039,0.00007310659,0.00003652749,0.00006125908],"domain_scores_gemma":[0.9993531,0.0001074313,0.0001323671,0.00002778588,0.0002292595,0.000150053],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001598183,0.00002519781,0.9750587,0.0000328659,0.00009674391,0.0001737464,0.001628518,0.0007278487,0.00690323,0.0003891324,0.0009700703,0.01383423],"study_design_scores_gemma":[0.00000400958,0.000009990979,0.9974536,0.000015301,0.00001310831,0.0000568508,0.0004523251,0.0009107564,0.00009957056,0.00001232812,0.0009675652,0.000004632972],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969567,0.0004460599,0.0002508936,0.0001017464,0.000002295149,0.00001399485,0.00101321,0.000009620789,0.001205523],"genre_scores_gemma":[0.9982768,0.0001234677,0.0002477717,0.0000291691,0.000001003978,0.000005811121,0.0007134599,0.000002860507,0.0005998048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0327816,"threshold_uncertainty_score":0.06594926,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01780805881323466,"score_gpt":0.2125101866513748,"score_spread":0.1947021278381402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}