{"id":"W2273208855","doi":"10.1093/gbe/evw011","title":"Group II Intron-Mediated<i>Trans</i>-Splicing in the Gene-Rich Mitochondrial Genome of an Enigmatic Eukaryote,<i>Diphylleia rotans</i>","year":2016,"lang":"en","type":"letter","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Japan Society for the Promotion of Science","keywords":"Biology; Intron; Trans-splicing; Group II intron; RNA splicing; Genetics; Group I catalytic intron; Gene; Eukaryote; Genome; Mitochondrial DNA; Phylogenetic tree; Evolutionary biology; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008447204,0.0001873501,0.0001199293,0.0001550638,0.0002206518,0.0002894047,0.0001610894,0.0002470328,0.0005350072],"category_scores_gemma":[0.0001970779,0.00009000189,0.0002229495,0.0001892836,0.0002095865,0.0002397099,0.0002220794,0.0003177538,0.0003308923],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001296061,"about_ca_system_score_gemma":0.0001515394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003304639,"about_ca_topic_score_gemma":0.0004726386,"domain_scores_codex":[0.9998995,0.000008800512,0.000008067397,0.00004832329,0.00002147948,0.00001384845],"domain_scores_gemma":[0.9998406,0.00002130867,0.00007351691,0.00002250455,0.0000200608,0.00002200591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004430717,0.000006924121,0.005456831,0.00006381079,0.000005010245,0.0004194185,0.0001686083,0.00007476468,0.9895281,0.0004674999,0.00004152405,0.003723122],"study_design_scores_gemma":[0.00001970521,0.0004397343,0.170521,0.0000702992,0.000107018,0.007253046,0.0007661507,0.003311899,0.7981061,0.001263094,0.01810784,0.00003404411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910664,0.0008910473,0.00578322,0.00006188711,0.00001922618,0.00001189574,0.0001861101,0.00006983364,0.00191027],"genre_scores_gemma":[0.993874,0.0002954174,0.003512394,0.0000688454,0.00001090612,0.000008673844,0.0007634931,0.00003031797,0.001436001],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005350072,"threshold_uncertainty_score":0.001789808,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00580919687046789,"score_gpt":0.2073991379390196,"score_spread":0.2015899410685517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}