{"id":"W2274123509","doi":"10.1128/genomea.01768-15","title":"Full Genome of <i>Phialocephala scopiformis</i> DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant and fungal interactions","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Carleton University","funders":"Office of Science; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Agriculture and Agri-Food Canada; Joint Genome Institute; U.S. Department of Energy","keywords":"Endophyte; Biology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001585071,0.0009191792,0.0006367408,0.0009850374,0.000965916,0.0007650003,0.0006468417,0.0007373843,0.008286408],"category_scores_gemma":[0.0004962906,0.0003343685,0.0006584332,0.002120534,0.000262523,0.0003424379,0.000366831,0.001233469,0.004298361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002076945,"about_ca_system_score_gemma":0.003503299,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.2783362,"about_ca_topic_score_gemma":0.3399563,"domain_scores_codex":[0.9998615,0.000006789414,0.000007192626,0.00003668111,0.00005383148,0.00003395193],"domain_scores_gemma":[0.9996427,0.00004201808,0.00005463779,0.00003221782,0.0001462652,0.00008224686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001232864,0.0001409836,0.005737271,0.00147486,0.000125651,0.0007844852,0.0005063979,0.001030218,0.9370512,0.0007737111,0.0220696,0.02907269],"study_design_scores_gemma":[0.000333446,0.0004710571,0.3149574,0.0004884465,0.0006006547,0.001659437,0.001145368,0.003716804,0.1234944,0.000865242,0.5519921,0.0002756988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1527497,0.002559971,0.01112821,0.0008357966,0.0002264888,0.000410973,0.8113798,0.001966005,0.018743],"genre_scores_gemma":[0.1102832,0.001322203,0.01405647,0.0002707659,0.00002794221,0.00015567,0.8605347,0.0004283937,0.0129206],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.2783362,"threshold_uncertainty_score":0.5534322,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02151681304557455,"score_gpt":0.2124521699041021,"score_spread":0.1909353568585276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}