{"id":"W2274728014","doi":"10.1158/1538-7755.disp13-c68","title":"Abstract C68: Global transcriptome sequencing of ethnically diverse formalin-fixed patient samples identifies biomarkers of recurrence in prostate cancer","year":2014,"lang":"en","type":"article","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Prostate cancer; Transcriptome; Single-nucleotide polymorphism; Gene; Cancer; Medicine; CHEK2; Oncology; Biology; Internal medicine; Genetics; Gene expression; Genotype; Germline mutation; Mutation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004330439,0.0003326243,0.0005698905,0.0005839459,0.0004916759,0.0005466228,0.0003008391,0.0003562965,0.003192609],"category_scores_gemma":[0.0009325373,0.0001229337,0.0004373419,0.0008787228,0.000218438,0.000158182,0.0004384968,0.0004772723,0.0008271533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003031971,"about_ca_system_score_gemma":0.0005797631,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002663906,"about_ca_topic_score_gemma":0.004549689,"domain_scores_codex":[0.9996232,0.00005846027,0.00002311786,0.0001365796,0.00008213489,0.00007656404],"domain_scores_gemma":[0.9995797,0.0000971885,0.0000796739,0.00005675587,0.0001190372,0.00006761726],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002804142,0.0002972612,0.3622233,0.0006331659,0.0006543943,0.0006229939,0.0004509166,0.003452125,0.5208684,0.0005504464,0.02723423,0.08020875],"study_design_scores_gemma":[0.000170827,0.0008145101,0.8964361,0.00006738769,0.0004071786,0.001835076,0.0005038861,0.007348686,0.06572368,0.0006890247,0.02592774,0.00007589828],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9583099,0.001215724,0.004830292,0.0005650686,0.0001134554,0.00009738671,0.03245403,0.00027256,0.002141495],"genre_scores_gemma":[0.9148293,0.0006279247,0.008638392,0.0005254427,0.0001003971,0.0002726449,0.07197809,0.0001179023,0.002909903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003192609,"threshold_uncertainty_score":0.01068032,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1008577477828155,"score_gpt":0.4061758018480057,"score_spread":0.3053180540651901,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}