{"id":"W2277023579","doi":"10.1128/genomea.01017-15","title":"Complete Genome and Plasmid Sequences of Three Canadian Strains of Salmonella enterica subsp. <i>enterica</i> Serovar Enteritidis Belonging to Phage Types 8, 13, and 13a","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Public Health Agency of Canada","funders":"Public Health Agency; Government of Canada; University of Guelph","keywords":"Salmonella enterica; Biology; Serotype; Plasmid; Microbiology; Salmonella enteritidis; Genome; Salmonella; Virology; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002785441,0.0009424943,0.0006531015,0.00234305,0.001283291,0.0007133799,0.0008371634,0.0005517472,0.003145875],"category_scores_gemma":[0.0007721224,0.0003973531,0.0009155775,0.004303256,0.0005256768,0.0003268363,0.0006557947,0.001225422,0.001805642],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002500043,"about_ca_system_score_gemma":0.01366566,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.4508914,"about_ca_topic_score_gemma":0.4978555,"domain_scores_codex":[0.999651,0.00001293022,0.00001994673,0.00006340559,0.0001551196,0.0000976777],"domain_scores_gemma":[0.9990855,0.00007946283,0.0001418371,0.00006040551,0.0004130251,0.0002197289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0027903,0.0004305142,0.01987183,0.002335511,0.0001636314,0.001319678,0.002327994,0.00179684,0.8767858,0.002062957,0.01742305,0.07269179],"study_design_scores_gemma":[0.000299449,0.0007563889,0.6743297,0.0003472934,0.0007185827,0.001777676,0.001896781,0.001703159,0.07121508,0.001191469,0.2455014,0.0002630443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3658526,0.00493345,0.01203692,0.0008453022,0.0002047452,0.0007362732,0.6029144,0.0006210597,0.01185528],"genre_scores_gemma":[0.1629738,0.00284326,0.01928852,0.0002233984,0.00004403202,0.0002308634,0.8059751,0.0001632575,0.0082578],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.5491086,"threshold_uncertainty_score":0.8965338,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05027820121771129,"score_gpt":0.2352732998156793,"score_spread":0.184995098597968,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}