{"id":"W2280416398","doi":"10.1128/aem.02017-15","title":"Dehalogenimonas sp. Strain WBC-2 Genome and Identification of Its <i>trans</i> -Dichloroethene Reductive Dehalogenase, TdrA","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalogenase; Dehalococcoides; Operon; Corrinoid; Genome; Biology; Biochemistry; Chemistry; Genetics; Gene; Escherichia coli; Vinyl chloride","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001981099,0.000625092,0.0007963903,0.0006376043,0.000254582,0.0005325175,0.0003440308,0.000416396,0.0006376918],"category_scores_gemma":[0.000376929,0.0002310938,0.0005899005,0.001062412,0.0001493987,0.0002528071,0.0004913611,0.0006965884,0.0005026073],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002354409,"about_ca_system_score_gemma":0.0004784026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002545071,"about_ca_topic_score_gemma":0.002883653,"domain_scores_codex":[0.9996519,0.00001614427,0.0000372371,0.0001269181,0.0001182558,0.00004958432],"domain_scores_gemma":[0.9997829,0.00003903015,0.00006597047,0.00002898909,0.00005842731,0.00002467606],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000571702,0.0000299016,0.000958426,0.0000714995,0.000005055971,0.00005795597,0.0000551888,0.00004862978,0.9952507,0.00003235311,0.00004649975,0.003386617],"study_design_scores_gemma":[0.00006446361,0.0008493342,0.1527745,0.0001177769,0.0002831861,0.001929974,0.0005130249,0.002453617,0.8176569,0.000232182,0.02306084,0.00006423501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9546984,0.001598204,0.01200477,0.0002683668,0.00007094863,0.0003567372,0.02784577,0.0003451766,0.002811697],"genre_scores_gemma":[0.8080692,0.002772852,0.05727439,0.000301594,0.0000468693,0.0006498211,0.1233203,0.0002393419,0.007325542],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002545071,"threshold_uncertainty_score":0.005060494,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009879822336764791,"score_gpt":0.1886708090143639,"score_spread":0.1787909866775991,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}