{"id":"W2283189806","doi":"10.1371/journal.pone.0149345","title":"Evidence for Host-Genotype Associations of Borrelia burgdorferi Sensu Stricto","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Université de Montréal","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Borrelia burgdorferi; Phylogenetic tree; Multilocus sequence typing; Genotype; Host adaptation; Host (biology); Borrelia; Sensu; Locus (genetics); Phylogenetics; Genetics; Genetic variation; Zoology; Gene; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007008601,0.0002319368,0.0001987511,0.000830553,0.0005019371,0.0004190888,0.0001673783,0.0002370345,0.001132258],"category_scores_gemma":[0.001182945,0.0001934724,0.0001443126,0.0007100313,0.0006772678,0.0001055366,0.0002288261,0.0001849914,0.00006979399],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003991321,"about_ca_system_score_gemma":0.0004987859,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05083601,"about_ca_topic_score_gemma":0.1491315,"domain_scores_codex":[0.9994874,0.0001866284,0.00002776416,0.0001229235,0.00008016276,0.00009510343],"domain_scores_gemma":[0.9985545,0.0004316341,0.0004832832,0.0001251708,0.0002137749,0.0001916178],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002518336,0.00002145069,0.9832224,0.00002286946,0.00008609381,0.00009964738,0.0006403794,0.0000413771,0.01345503,0.00003214211,0.00004759193,0.002079113],"study_design_scores_gemma":[0.000002156883,0.00002491909,0.9993881,0.000003441349,0.00001462423,0.00009524738,0.0002100417,0.00003466728,0.0001415204,0.00001016945,0.00007351279,0.000001570185],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994434,0.00016926,0.00004365119,0.00001583709,0.000001238066,0.000001431635,0.00006477343,9.151826e-7,0.0002595602],"genre_scores_gemma":[0.9996548,0.00009874873,0.00007403171,0.00001703718,0.000002010223,0.000001758004,0.00008350372,8.380439e-7,0.00006736834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05083601,"threshold_uncertainty_score":0.1010802,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09022992753916806,"score_gpt":0.2808349155136156,"score_spread":0.1906049879744476,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}