{"id":"W2283750877","doi":"10.1111/jpy.12383","title":"Resolving the phylogenetic relationship between <i>Chlamydomonas</i> sp. <scp>UWO</scp> 241 and <i>Chlamydomonas raudensis</i> sag 49.72 (Chlorophyceae) with nuclear and plastid <scp>DNA</scp> sequences","year":2015,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Phylogenetic tree; Biology; Chlamydomonas; Chlorophyceae; Phylogenetics; Lineage (genetic); Clade; Evolutionary biology; Plastid; Algae; Chlorophyta; Botany; Genetics; Gene; Chloroplast","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001995904,0.0001662257,0.0002093151,0.0005732974,0.0007061801,0.0005954294,0.0001916784,0.0003920733,0.0005097387],"category_scores_gemma":[0.0005413954,0.0001566349,0.0001952827,0.0006848528,0.0002697151,0.0002838238,0.0007716968,0.0004269608,0.0002344146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002193004,"about_ca_system_score_gemma":0.0004858426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002126784,"about_ca_topic_score_gemma":0.00414894,"domain_scores_codex":[0.9998536,0.00001286808,0.00001181614,0.00004702514,0.00002544021,0.00004931784],"domain_scores_gemma":[0.9996154,0.00006849549,0.0001337144,0.00004535905,0.00004443628,0.00009257325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001744216,0.00003880374,0.132233,0.00009363862,0.00003846361,0.0002824087,0.0008660008,0.0001288982,0.8547078,0.0003001647,0.00006361803,0.01107263],"study_design_scores_gemma":[0.00001563824,0.0004754883,0.919242,0.00009501209,0.0001457485,0.002414485,0.004538358,0.001293487,0.05281351,0.0004723961,0.0184586,0.00003534333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984775,0.0002917921,0.0005472872,0.00002075291,0.000004394256,0.000007347744,0.0001512085,0.000004056792,0.0004956444],"genre_scores_gemma":[0.9969661,0.0002475672,0.001590572,0.00004992586,0.000004170795,0.00001267848,0.0009069603,0.00000441797,0.0002176237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002126784,"threshold_uncertainty_score":0.00422889,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02310623282766929,"score_gpt":0.2277324609109429,"score_spread":0.2046262280832736,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}