{"id":"W2289710339","doi":"10.1128/genomea.00480-15","title":"Complete Genome Sequence of Streptococcus thermophilus SMQ-301, a Model Strain for Phage-Host Interactions","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Université Laval","funders":"","keywords":"Streptococcus thermophilus; Biology; Whole genome sequencing; Genome; Strain (injury); Virulence; Gene; Genetics; Host (biology); Microbiology; Computational biology; Bacteria; Lactobacillus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004148782,0.001338893,0.001091019,0.001777511,0.0008733339,0.0005076898,0.000422472,0.0007588635,0.003372514],"category_scores_gemma":[0.0007160709,0.000380771,0.0008857614,0.003284848,0.0002701274,0.0004131971,0.0004746588,0.0009383744,0.003292446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005640161,"about_ca_system_score_gemma":0.0021653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009115399,"about_ca_topic_score_gemma":0.007152213,"domain_scores_codex":[0.999686,0.00004920699,0.00003807995,0.00006279975,0.0001161475,0.00004774087],"domain_scores_gemma":[0.9995435,0.00008653428,0.00008643597,0.00004285294,0.0001451337,0.00009563466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001763568,0.0002030764,0.004988234,0.001795842,0.00007496313,0.0005795138,0.0003594673,0.001191798,0.9601566,0.0005688537,0.008563517,0.01975459],"study_design_scores_gemma":[0.0006462825,0.002231146,0.3632682,0.000774025,0.001239636,0.003309608,0.00117886,0.009980075,0.2494217,0.00237879,0.3651199,0.0004516837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4334006,0.006508944,0.01763629,0.0007030739,0.000318981,0.0004864337,0.5307843,0.001382106,0.008779276],"genre_scores_gemma":[0.1935925,0.002403349,0.0256287,0.0001675979,0.0000633082,0.0003610125,0.7729937,0.0003596364,0.004430124],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.009115399,"threshold_uncertainty_score":0.0181247,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09819957538935195,"score_gpt":0.310243189003055,"score_spread":0.212043613613703,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}