{"id":"W2294941565","doi":"10.1016/j.copbio.2016.02.017","title":"Targeted metagenomics of active microbial populations with stable-isotope probing","year":2016,"lang":"en","type":"review","venue":"Current Opinion in Biotechnology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":75,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK; University of East Anglia; Gordon and Betty Moore Foundation","keywords":"Metagenomics; Stable-isotope probing; Computational biology; Microorganism; Biology; Genome; Biochemical engineering; Biotechnology; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002026305,0.0003742465,0.001232252,0.0003476427,0.0001180889,0.000004813551,0.0007929594,0.0008987813,0.001170028],"category_scores_gemma":[0.00004490658,0.0002758571,0.000152971,0.0006442106,0.000758583,0.00009017876,0.000714301,0.001011686,0.0001453843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003389897,"about_ca_system_score_gemma":0.0001049445,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007973467,"about_ca_topic_score_gemma":0.000224092,"domain_scores_codex":[0.9979638,0.0004002898,0.0006583215,0.0004958381,0.00006494561,0.0004167625],"domain_scores_gemma":[0.9985515,0.0001156538,0.0006498185,0.0006318686,0.00001258897,0.00003853803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005924126,0.0003700341,0.00009172321,0.003027214,0.0001040844,6.58977e-7,0.0001402924,0.00004270861,0.0009429161,0.002475861,0.001941362,0.9908039],"study_design_scores_gemma":[0.0002856474,0.000124644,0.00005388893,0.003100802,0.00005471984,0.00001892714,0.00001193202,0.000003030736,0.0001369718,0.0003594842,0.9955201,0.0003298472],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006429975,0.9942134,0.0005426127,0.0001145188,0.002190088,0.001690312,0.0003817055,0.0000812391,0.000143135],"genre_scores_gemma":[0.0002037112,0.998423,0.0006690631,0.000004539829,0.00004495352,0.00009928452,0.0004946818,0.00003349575,0.00002726657],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9935787,"threshold_uncertainty_score":0.9999694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08199705855435084,"score_gpt":0.3413160577805167,"score_spread":0.2593189992261658,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}