{"id":"W2295582949","doi":"10.1093/gbe/evw017","title":"Evolution of Chromosomal<i>Clostridium botulinum</i>Type E Neurotoxin Gene Clusters: Evidence Provided by Their Rare Plasmid-Borne Counterparts","year":2016,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Botulinum Toxin and Related Neurological Disorders","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Health Canada","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Plasmid; Biology; Genetics; Gene; Locus (genetics); Gene cluster; CRISPR; Direct repeat; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002758837,0.0002553478,0.0002614208,0.0009528007,0.0003520139,0.000564569,0.000306985,0.0004135173,0.0005547913],"category_scores_gemma":[0.000884785,0.0002188305,0.0002117616,0.0008344281,0.0002111422,0.000266143,0.0006512288,0.0003418276,0.0002302497],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004283783,"about_ca_system_score_gemma":0.0003673841,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002493774,"about_ca_topic_score_gemma":0.002788156,"domain_scores_codex":[0.9996845,0.00003014362,0.00002146478,0.00009745877,0.00007095817,0.00009565317],"domain_scores_gemma":[0.999117,0.0001879623,0.0002911859,0.000116142,0.0001458953,0.0001418733],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004497986,0.00006630702,0.0702216,0.0001404748,0.00004425593,0.0002723773,0.0002812602,0.0003276654,0.9101971,0.0003064616,0.0000588668,0.01763376],"study_design_scores_gemma":[0.00004787014,0.0007955902,0.8208975,0.00007644821,0.0001639026,0.003798297,0.0007084005,0.002079277,0.1638821,0.0003854103,0.007109019,0.0000562108],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979439,0.000408311,0.0008056043,0.00002524646,0.000002700496,0.00001110237,0.0002744326,0.00001294893,0.0005156478],"genre_scores_gemma":[0.9961526,0.0003942009,0.001857216,0.0000339807,0.000004688239,0.00001559622,0.00102306,0.00001511281,0.0005035733],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002493774,"threshold_uncertainty_score":0.00495857,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01582734988046957,"score_gpt":0.245004416885388,"score_spread":0.2291770670049184,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}