{"id":"W2301160122","doi":"10.1016/j.dib.2016.03.022","title":"Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4","year":2016,"lang":"en","type":"article","venue":"Data in Brief","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fuel Cell Technologies Program; VILLUM Center for Bioanalytical Sciences; Seventh Framework Programme; Syddansk Universitet; Faculty of Science and Engineering, University of Manchester; Villum Fonden; Vetenskapsrådet; Natural Sciences and Engineering Research Council of Canada; Knut och Alice Wallenbergs Stiftelse; IngaBritt och Arne Lundbergs Forskningsstiftelse; China National Funds for Distinguished Young Scientists; European Regional Development Fund; European Commission; Fundação para a Ciência e a Tecnologia; Natur og Univers, Det Frie Forskningsråd","keywords":"Glycome; Glycan; Gastric carcinoma; Receptor tyrosine kinase; Glycomics; Transfection; Tyrosine kinase; Identification (biology); Cancer research; Carcinoma; Cancer; Chemistry; Computational biology; Biology; Molecular biology; Gene; Receptor; Biochemistry; Genetics; Glycoprotein","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003849913,0.0001026516,0.0001332295,0.00007293966,0.00003077346,0.00002427626,0.0008746701,0.00009079625,0.00004030375],"category_scores_gemma":[0.0002368116,0.0000810189,0.00001192962,0.00009145984,0.0001243974,0.00002733015,0.001691902,0.00006783795,0.000007719074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009836135,"about_ca_system_score_gemma":0.00009701934,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003133699,"about_ca_topic_score_gemma":0.00008511993,"domain_scores_codex":[0.9987922,0.00007301853,0.0002216198,0.0005347189,0.0001597427,0.0002187186],"domain_scores_gemma":[0.9978973,0.00002674006,0.00007416414,0.001903068,0.00003227055,0.00006644383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001079472,0.00007423168,0.01054165,0.00002764593,0.000008449959,0.000004819389,0.000006188502,5.01204e-7,0.9732311,0.0000162192,0.003863263,0.01211803],"study_design_scores_gemma":[0.005454712,0.0001771358,0.03798831,0.0001031967,0.00001078631,0.00003047068,0.00002408339,0.0007564827,0.8784699,0.00006064858,0.0766422,0.0002820557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951462,0.0004213685,0.001624969,0.0001411623,0.00004119437,0.000232209,0.0021484,0.000004206759,0.0002402638],"genre_scores_gemma":[0.9964749,0.000239535,0.00173446,0.00003873427,0.00007995738,0.000004674955,0.001252089,0.00001426804,0.0001613817],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09476113,"threshold_uncertainty_score":0.3303855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04524603112927561,"score_gpt":0.303374130157576,"score_spread":0.2581280990283004,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}