{"id":"W2302697153","doi":"10.1128/genomea.00174-16","title":"Whole-Genome Sequence of <i>Bacillus</i> sp. SDLI1, Isolated from the Social Bee <i>Scaptotrigona depilis</i>","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Fogarty International Center; National Institutes of Health; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Whole genome sequencing; Stingless bee; Genome; Chromosome; Strain (injury); Gene; Genetics; Sequence (biology); Antimicrobial; Circular bacterial chromosome; Microbiology; Zoology; Anatomy; Apidae; Hymenoptera","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004420983,0.0002099974,0.0002580467,0.00001381835,0.0004935561,0.00006185922,0.000804526,0.0001282432,0.002022983],"category_scores_gemma":[0.00004673845,0.00006448155,0.0001359534,0.0004518186,0.0002600115,0.0001748701,0.0002221188,0.0001452404,0.0004292721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007579289,"about_ca_system_score_gemma":0.00004057377,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009502625,"about_ca_topic_score_gemma":0.000313392,"domain_scores_codex":[0.997878,0.0001557617,0.0003790673,0.0003887914,0.000606764,0.0005915819],"domain_scores_gemma":[0.9990909,0.0002977396,0.0001630559,0.0001141267,0.0002314213,0.0001027272],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009291724,0.00005911036,0.003517491,0.000003686782,0.00004770007,0.000005555857,0.0002766057,8.234505e-7,0.9842877,0.00004963692,0.0007175511,0.01094127],"study_design_scores_gemma":[0.001085789,0.0008236518,0.2196925,0.00006603551,0.00005752117,0.000006444983,0.0004771921,0.00001401457,0.00534028,0.003239776,0.7685371,0.0006596892],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866338,0.000478738,0.00002741253,0.003288179,0.0001457996,0.000349035,0.007526869,0.00004108329,0.001509133],"genre_scores_gemma":[0.9965128,0.0002098627,0.00001632991,0.000642895,0.0006023964,0.00002380061,0.0008516447,0.000002641503,0.001137612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9789474,"threshold_uncertainty_score":0.9988893,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04748065591011172,"score_gpt":0.2650216650502143,"score_spread":0.2175410091401026,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}