{"id":"W2305656340","doi":"10.1128/genomea.01718-15","title":"Draft Whole-Genome Sequences of 25 <i>Salmonella enterica</i> Strains Representing 24 Serovars","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Government of Canada; Public Health Agency of Canada","funders":"Government of Canada","keywords":"Salmonella enterica; Serotype; Biology; Genome; Salmonella; Selection (genetic algorithm); Genetics; Computational biology; Typing; Whole genome sequencing; Microbiology; Gene; Computer science; Bacteria; Artificial intelligence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001074447,0.001372332,0.0009507617,0.00242253,0.0007875387,0.001344719,0.0008950747,0.0008356251,0.006922118],"category_scores_gemma":[0.003816531,0.0008445696,0.001936077,0.004041053,0.0003377312,0.000814499,0.0009958522,0.001369533,0.0045009],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008198259,"about_ca_system_score_gemma":0.003292638,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009126612,"about_ca_topic_score_gemma":0.0111351,"domain_scores_codex":[0.9993449,0.00008831735,0.0001237175,0.0001476561,0.0001696669,0.0001258801],"domain_scores_gemma":[0.9974847,0.0004674449,0.0005705848,0.0002779235,0.0008466644,0.0003527881],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004498358,0.0004035572,0.02662232,0.0038725,0.0005945925,0.001697981,0.001560301,0.004418099,0.8329643,0.001677234,0.04107386,0.08061687],"study_design_scores_gemma":[0.0006986319,0.002162939,0.3181642,0.0008907365,0.002219443,0.002521495,0.001875488,0.007588651,0.1969465,0.002986121,0.4634942,0.0004517181],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3038246,0.002861673,0.03769116,0.001082962,0.0006513157,0.0008430665,0.643675,0.002729318,0.006640918],"genre_scores_gemma":[0.0555518,0.001071332,0.05783743,0.0002397142,0.00005624662,0.0004167754,0.8810405,0.0005515143,0.003234645],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.009126612,"threshold_uncertainty_score":0.02315682,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04108486353902954,"score_gpt":0.2487615359029581,"score_spread":0.2076766723639285,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}