{"id":"W2311857967","doi":"10.1128/genomea.00028-16","title":"Draft Genome Sequence of Pantoea ananatis GB1, a Plant-Growth-Promoting Hydrocarbonoclastic Root Endophyte, Isolated at a Diesel Fuel Phytoremediation Site Planted with <i>Populus</i>","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Thompson Rivers University","funders":"Universiteit Hasselt","keywords":"Phytoremediation; Biology; Pantoea; Endophyte; Botany; Whole genome sequencing; Strain (injury); Biological pest control; Rhizobacteria; Genome; Bacteria; Pseudomonas; Rhizosphere; Gene; Contamination; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001685552,0.0003659656,0.0003746097,0.00009913246,0.0001644472,0.00001892526,0.0002874719,0.0001256375,0.00001582292],"category_scores_gemma":[0.00004788788,0.0002740842,0.00008445942,0.0001978316,0.0001558499,0.000007018035,0.0002794125,0.00006503625,0.00001917234],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001014233,"about_ca_system_score_gemma":0.00009053861,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009300213,"about_ca_topic_score_gemma":0.0004568441,"domain_scores_codex":[0.9978977,0.00005886028,0.0004906263,0.0006568814,0.000319298,0.0005766274],"domain_scores_gemma":[0.9987991,0.00002904074,0.000396918,0.0004141497,0.0002329341,0.0001278828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003734024,0.00006794995,0.05547233,0.00008156718,0.00032792,0.00001388534,0.0004892419,0.00003689564,0.9429147,0.000005150744,0.00004566086,0.0001712876],"study_design_scores_gemma":[0.02134384,0.01273854,0.4433245,0.0009086368,0.000930055,0.0003588134,0.0004788693,0.001170352,0.4129957,0.000668771,0.09990767,0.005174248],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933534,0.002022631,0.0006816409,0.00007895028,0.0001831176,0.0004401538,0.002844753,0.0000132793,0.0003821283],"genre_scores_gemma":[0.996657,0.00132878,0.0002042109,0.00009627567,0.0001837549,0.00006692474,0.00108624,0.00004372014,0.0003330626],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.529919,"threshold_uncertainty_score":0.9999712,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0102465541163727,"score_gpt":0.2034933702972076,"score_spread":0.1932468161808349,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}