{"id":"W2313132546","doi":"10.3852/12-035","title":"Phylogenetic classification of <i>Pleurothecium</i> and <i>Pleurotheciella</i> gen. nov. and its dactylaria-like anamorph (Sordariomycetes) based on nuclear ribosomal and protein-coding genes","year":2012,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Phylogenetic tree; Internal transcribed spacer; Clade; Monophyly; Ribosomal DNA; Phylogenetics; Botany; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003874277,0.0004618481,0.000324284,0.001087655,0.0004243623,0.0007838995,0.000607259,0.0005862905,0.0008669375],"category_scores_gemma":[0.0005423261,0.0002158523,0.0004457558,0.0008614394,0.0003203227,0.0005316336,0.0005451204,0.0006020705,0.0007239301],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003843346,"about_ca_system_score_gemma":0.0005185221,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001350153,"about_ca_topic_score_gemma":0.001391896,"domain_scores_codex":[0.9997155,0.00005358577,0.00003552174,0.00007357104,0.00005275158,0.00006900927],"domain_scores_gemma":[0.9995684,0.00006619874,0.0001513779,0.00004346933,0.0000984306,0.0000721192],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001295033,0.0003504732,0.1318131,0.0006796301,0.000222881,0.001275362,0.001883182,0.001938082,0.7486,0.000666999,0.001374341,0.1099008],"study_design_scores_gemma":[0.0001128028,0.001305243,0.9143633,0.0004234091,0.0003297818,0.004108838,0.001862164,0.006010979,0.02234674,0.0002816805,0.04878259,0.00007253523],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901437,0.002412642,0.002072435,0.0001652487,0.00006415573,0.0001206271,0.0009938391,0.00007652526,0.003950809],"genre_scores_gemma":[0.9767517,0.001543579,0.008962141,0.0003439926,0.00006134452,0.0001505382,0.01064099,0.00003660422,0.001509113],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001350153,"threshold_uncertainty_score":0.002900243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01650354863459138,"score_gpt":0.2206983975150284,"score_spread":0.204194848880437,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}